Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0983 ATGACTGAGAGATTAACGGAGCTGAAGCTAAAAAACACAGCTGTGTCTCCAAGGGGGCGATGCGTGGCGCCGTTTCTGGTGAAGACATATGATTTGGTGGAAGAAGGTGGAGAAGTAGTAGAAGGCAAAGAAGAAAGGAATGAGAGATCATCAACATCAATGATAGTGTCATGGAATGAGGAAGGAGATGGTTTTGTAGTGTGGCGTCCTGCTGAATTCTCAGAGCTTATTTTGCCCAAATACTTCAAGCACAATAACTTCTCTAGCTTCATTCGCCAATTGAACACCTATGGGTTTAAAAAAGTGTCATCAAAGAGGTGGGAATTCAAGCAGGAGAAATTTCAGAGAGGCAACAAGAAATTACTGGCGGGAATAACAAGGAAGAAGTGTGAGCCAAGTGTTTTCCCTTCATACTTGAAGTCTTGTTCAGAAGAAAATGAAGAAACCAACAATGAACATGAATTACTTGTACAGCAGAACCAAGACCTGAAGAAGCAGAACCAGCACTTGCAATCACAAATTGCTCACTTCAAACAATTACAAACCAGGTTGTTTCATTACGTCTCTCAATATATGGGCACTTCCTCAAAGTAA 594 0.4125 MTERLTELKLKNTAVSPRGRCVAPFLVKTYDLVEEGGEVVEGKEERNERSSTSMIVSWNEEGDGFVVWRPAEFSELILPKYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKQEKFQRGNKKLLAGITRKKCEPSVFPSYLKSCSEENEETNNEHELLVQQNQDLKKQNQHLQSQIAHFKQLQTRLFHYVSQYMGTSSK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0983 197 ProSitePatterns HSF-type DNA-binding domain signature. 78 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 Coils Coil 139 180 - -
Mibi06g0983 197 Pfam HSF-type DNA-binding 25 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 188 IPR027725 -
Mibi06g0983 197 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 PRINTS Heat shock factor (HSF) domain signature 90 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 PRINTS Heat shock factor (HSF) domain signature 39 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 Gene3D - 18 129 IPR036388 -
Mibi06g0983 197 SUPERFAMILY "Winged helix" DNA-binding domain 23 128 IPR036390 -
Mibi06g0983 197 SMART hsfneu3 21 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g0983 197 FunFam Heat stress transcription factor A-6b 18 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0983 Mibi-ChrMibi06 29477420 29481136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0983 13 192 HSF AT4G36990 38.942 5.64e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi06g0983 HSF_DNA-bind 2.4e-29 CL0123