Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0933 ATGGACAGTTCGGATTCATGTTCAGGGAGTCATCATCATCAGCATCCTCAGCTTCCTCCTGGTTTCCGATTTCATCCCACCGACGAAGAGCTCCTCGTTCACTACCTCCAGCCAAAAGCCTCCTCCGCTCCCCTCCCTGTCGCCATTATCGCCGACGTCGATCTCTACAAGTTCGACCCCTGGGAGCTCCCCAGTAAGGCAGCGTTTGGGGAGCAGGAGTGGTATTTCTTCAGCCCACGAGATAGAAAGTATCCGAATGGAGCGAGGCCAAACAGGGCGGCCACATCGGGGTATTGGAAGGCAACGGGTACGGACAAGCCGATATTGTCGTCGGACGGAAGGAACCAGAAGGTGGGTGTGAAGAAGGCTCTCGTATTCTATGGCGGGAAGCCTCCAAAAGGCGTCAAAACCAATTGGATCATGCACGAATATAGACTCACCCAAAACACTACTATTCATTCTTACAATAATCCCATCCCTAAGCCTCCTCCTCTGGTTTCCTCTGATCCTCCTGCCTCATCACAATCCACCAACAAAAACTCCTTAAGGCTTGATAACTGGGTATTGTGTCGAATATACAAGAAAAGCAACAGTAACAATATGAATATGCAAAGGCCGCCATTAATGGATCAGGAGAGGCAGGTTTGTATGGAGGCTATGATTCCCACCATCTCAACTTTATCAATGGCTAACAATGGAGTTGAGAATAACGATGACAACTTGTTCGCCGGAATTCTAGGAATCTCCAGCGGCGGCGGAGAATCTCATGATGATCATCATCATCATCACTTGATGTCATTAAACTCATCCAAGGCCGGCGTGAAACGACCCCTGCCGCCGCCGCCATTTTGGAACGACACGACGGAGGGCTCGCCGTCGGGATCGTCGTCGTCGAGCAAGAGATTCCAAGGTGGTCTGAACAGTAGTGGTGGTGGTGGTGGGATGAGTATTACTAATACTAGTACTACTTCGGCTGATGATGAGAACAGTTCGTTTATTTCTCTGCTGAGCCAGCTTCCTGCTCATCAACATCATCACAATACGACGACGTTTCTTGGCTCTGTTGGTGATGGTGTTTTGAGGCAACAGTTTCAACTTCCAAGCTTGAATTGGACCTCATAG 1122 0.4955 MDSSDSCSGSHHHQHPQLPPGFRFHPTDEELLVHYLQPKASSAPLPVAIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTQNTTIHSYNNPIPKPPPLVSSDPPASSQSTNKNSLRLDNWVLCRIYKKSNSNNMNMQRPPLMDQERQVCMEAMIPTISTLSMANNGVENNDDNLFAGILGISSGGGESHDDHHHHHLMSLNSSKAGVKRPLPPPPFWNDTTEGSPSGSSSSSKRFQGGLNSSGGGGGMSITNTSTTSADDENSSFISLLSQLPAHQHHHNTTTFLGSVGDGVLRQQFQLPSLNWTS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0933 373 Gene3D NAC domain 27 200 IPR036093 GO:0003677|GO:0006355
Mibi06g0933 373 PANTHER NAC TRANSCRIPTION FACTOR 56 18 238 - -
Mibi06g0933 373 MobiDBLite consensus disorder prediction 1 23 - -
Mibi06g0933 373 MobiDBLite consensus disorder prediction 268 327 - -
Mibi06g0933 373 MobiDBLite consensus disorder prediction 287 327 - -
Mibi06g0933 373 MobiDBLite consensus disorder prediction 156 180 - -
Mibi06g0933 373 ProSiteProfiles NAC domain profile. 18 195 IPR003441 GO:0003677|GO:0006355
Mibi06g0933 373 Pfam No apical meristem (NAM) protein 19 146 IPR003441 GO:0003677|GO:0006355
Mibi06g0933 373 SUPERFAMILY NAC domain 11 195 IPR036093 GO:0003677|GO:0006355
Mibi06g0933 373 FunFam NAC transcription factor 56 27 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0933 Mibi-ChrMibi06 28566555 28568538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0933 15 373 NAC Transcription Factor Family AT1G61110 49.596 2.79e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g0933 NAM 2.9e-39 No_clan