Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0897 ATGGCTACTACTGTTGGCTCGTCTTCTTCTTCTTCTTCCTCCTCTTCTAAGGTCTGCTACAATTCTGAGTGTAAAGAATTGAAGTCTGATAGACCTAAGAAGGGTTGGAGACTCCGTACTGGTGACTTCGCCGAGCTCTGTGATCGATGCGGTTCTGCTTTTGAGGAAGGAAGGTTCTGTGAAATTTATCACTCAAAAGCTTCTGGTTGGAGGACTTGTGAGACATGTGGGAAGGGGATTCATTGCGGGTGTATTGTTTCAAGTACAGCCTTTATGTTGTTAGATCCTGGAGGGATTGAATGCATTCCATGCGCCAGGAAGAATATTATTTTGTCTTCTAATCTACCTTGGTCCCCATCTTTTCCTCTTCAAAGTCGTTTTAGAGACCTGACTTCAAAAAATTGGAGCCAGTTAGCTGGATCAGGTCCTGTGCCATGGAAGCAAGCTCCCAGTCTGTTCAATACAACAACTTCATCTGACCGGCACCCAGATGTTCCATCCGTAGTTGAAATATCTAGTGTCGACAACATTTATGGAAATGAAAGGATATCTGCCTCACCTCTGGATAAGAAAAGTGATGATCTTACTGGAATACCAGCAAATTGGAATGTAAAGATTGGCCCACGGGAAATGATGTTTATAAATGGAATGCGGAATGATGAAAAGTCGAGTTCTTGCTTGAATATGTGCCAGCAACCGTCTTTAAAGGAGGATTCATCAGCCCAACCATTTGGTTTGACTGTACCTTATGCACATCAAAATGAAAGAAATGGTCAAATTGGGGTAACTGGGAGTCATTCGCATCAAACTCCTCCACCTCCTCATGGAAAACAATTTACTGGCCCAGTACATGTTGCACTTGATTCATCAGGTGAATCACAGGTGCGAAATGGACGGCCCAGAGCAGATGCCCGAGGAAGGAATCAGTTACTGCCCCGGTACTGGCCTAGGTGCACTGATCAGGAGCTACATCAAATATCTCTAGACGCCAATTCTGTGATAACTCCATTGTTCCAAAAGACATTGAGTGCTAGTGATGCTGGGCGAATTGGGCGATTAGTGCTACCAAAAAAATGTGCTGAGGCCTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCTCTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGATTTTGGCCCAACAATAACAGTAGAATGTATGTTTTAGAAGGCGTTACTCCATGCATACAGTCCATGCAATTGCAAGCTGGTGACACAGTGACGTTTAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCTACCCAATCTGATCAGGACAATGAAACAAACAATACTGGAAATGGATATTCTACACATGGTGAAGCCGAATTGGATCCTAGTTCGTGGTCTAAAGTTGATAAATCAGGATATATAGCAAAAGAAGCACTGGGGAGCAAATCTTCCATTGCTAGGAAGAGAAAGAATAGTGCCTTGGGTTCCAAGAGTAAGCGACTAAGAATTGAAAATGAGGATCTGATAGAGTTGAATATTACATGGGAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAGTATGAGGATGCTCCAGTGCTTGGGAAACCGACAATTTTCTCTACTGACAGTGTTGGTGAAAAAATTCAGTGGGCTCAATGTGAAGATTGTCAAAAATGGCGCAAATTGCCAGCTAATGCTCTTCTAACATCAAGATGGACGTGTTCAGACAATCCATGGGACCCAGAAAGATCATGTTCGACTGCACAGGAGCTGACAGCAGAACAGCTTGAGGATTTGCTTCCCCCTTGTAATTCAGTTGTATCCAAGAAACTGAAGACTGCCAAGCAGGATCCTGATAATGTTGAAGCTTTGGAAGGACTTGACACTCTTGCTAATTTAGCTATCTTGGGGGAAGGGGAGGCTCTCCCAGCATCTGCCCAGGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAACCTCCTAGTGGGAAGGGGCCCAAGCATAAGCAGACTTGCACATGTAATGTTTGCTTAACAGTGAAGCGCCGTTTCCGTACCTTGATGTTACGGCGTGAGAAGAAACAATCAGAGAGAGAAGCAGAGACAACACGTAAAAAGCAGCAACCTCAGCCACCGCAGCTGCCACCACCTATGTCGGAGATATTGCTTGATGATGATTCCCTGCCTTGCAGTAACACAGGAGATAGTAGTAGTCCTAATCAGAACAGGGAGGGCAATGAAGGTTCTGACGATGACCCTAACAAGACAAAGTCATCCGCCTCACCATTTAAAGGCCAGATTGACCTCAATATTCAGCCAGAACGGGAGGAAGAGTTGTCTCCCAGTTCAGATTCTGGAAGTGTGATTAAGTTGATTCATAGTGCCACTGAGAGGTATCTGAGGCAGCAGAGTATGGTGAACTCTTTTGCTGGGGATACTTCAGGTGGACAGTCGCAGCAGGTTGGAGATGACGCAAGGGAAGAGAAACTTTGCAATGGTGTAGCCCTTGGCAGTAATAATCATAATGCTGACAAGGAACATGCCCAAACATTGTCCATGAATGTGTGA 2652 0.4502 MATTVGSSSSSSSSSSKVCYNSECKELKSDRPKKGWRLRTGDFAELCDRCGSAFEEGRFCEIYHSKASGWRTCETCGKGIHCGCIVSSTAFMLLDPGGIECIPCARKNIILSSNLPWSPSFPLQSRFRDLTSKNWSQLAGSGPVPWKQAPSLFNTTTSSDRHPDVPSVVEISSVDNIYGNERISASPLDKKSDDLTGIPANWNVKIGPREMMFINGMRNDEKSSSCLNMCQQPSLKEDSSAQPFGLTVPYAHQNERNGQIGVTGSHSHQTPPPPHGKQFTGPVHVALDSSGESQVRNGRPRADARGRNQLLPRYWPRCTDQELHQISLDANSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSDQDNETNNTGNGYSTHGEAELDPSSWSKVDKSGYIAKEALGSKSSIARKRKNSALGSKSKRLRIENEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFSTDSVGEKIQWAQCEDCQKWRKLPANALLTSRWTCSDNPWDPERSCSTAQELTAEQLEDLLPPCNSVVSKKLKTAKQDPDNVEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQPQPPQLPPPMSEILLDDDSLPCSNTGDSSSPNQNREGNEGSDDDPNKTKSSASPFKGQIDLNIQPEREEELSPSSDSGSVIKLIHSATERYLRQQSMVNSFAGDTSGGQSQQVGDDAREEKLCNGVALGSNNHNADKEHAQTLSMNV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0897 883 MobiDBLite consensus disorder prediction 257 283 - -
Mibi06g0897 883 MobiDBLite consensus disorder prediction 437 465 - -
Mibi06g0897 883 MobiDBLite consensus disorder prediction 863 883 - -
Mibi06g0897 883 Gene3D - 560 616 - -
Mibi06g0897 883 ProSiteProfiles Zinc finger CW-type profile. 565 614 IPR011124 GO:0008270
Mibi06g0897 883 MobiDBLite consensus disorder prediction 718 733 - -
Mibi06g0897 883 Gene3D - 316 443 IPR015300 -
Mibi06g0897 883 MobiDBLite consensus disorder prediction 436 470 - -
Mibi06g0897 883 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 16 844 - -
Mibi06g0897 883 MobiDBLite consensus disorder prediction 257 274 - -
Mibi06g0897 883 MobiDBLite consensus disorder prediction 717 814 - -
Mibi06g0897 883 Pfam B3 DNA binding domain 338 437 IPR003340 GO:0003677
Mibi06g0897 883 SUPERFAMILY DNA-binding pseudobarrel domain 335 438 IPR015300 -
Mibi06g0897 883 CDD B3_DNA 336 437 IPR003340 GO:0003677
Mibi06g0897 883 ProSiteProfiles B3 DNA-binding domain profile. 338 439 IPR003340 GO:0003677
Mibi06g0897 883 MobiDBLite consensus disorder prediction 757 772 - -
Mibi06g0897 883 SMART B3_2 338 439 IPR003340 GO:0003677
Mibi06g0897 883 FunFam B3 domain-containing transcription repressor VAL1 316 443 - -
Mibi06g0897 883 Pfam CW-type Zinc Finger 570 611 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0897 Mibi-ChrMibi06 28087418 28098450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0897 15 722 B3 DNA Binding Superfamily AT4G32010 46.250 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi06g0897 B3 9.6e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0897 06 28087418 28098450 Mibi06g0897 06 28087418 28098450 ECH