Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0876 ATGGATTTTGAGCATTCATGTGATGTATACCCAGCAGACACCAATACCATCATTTCTGCCGAGACCTTCATCTCACCTTCTTCACCTGAACAATACTTTAAGGTGGAAGTGGAATGCAAAGAATACTTTATTTGGGATGGTATGAGTCTAGATAGCTTTATACTTCCGAAAGAGTGTGGATTCTCAAACATCCTAAAGCAAGACATGGAGAAGTTCGTAGATATGCTTTTGCCTTATTTTCATGTTCCTCAACATGCTCGGCCTAGTACGGCAGCAAAAATCTTGGCATGTGCCCAACACATGGCGAATGTAACTCACAAAAACCACAAGATTATGGGTATGCGTGTCATTTTTACAAATACTACTGAAGTTTATGAGTATGAATATCGTCTTCTTCGTAGGAGTTTGGAGGAATCAATGGATGAAAATGAATGTCCTATGAAAGCTAATCCAGCGTGCAAGTTTTCATTTGAAGGGTTGGAAAGGGTGAATGTGGCAGAACAAAAAGAAGAAGAAGGGAATAATAGTATGATGGCAAAGTATTGTAAATGCACAATTTGCTTGGAAGATTTTTCAATCAAGCCTAGGGCTCTTCGTATGCCTTGCTTGCATTTATTTCACAGCAAATGCCTCTTTTATTGGTTGAAGGTTCGCAACACTTGTCCTCTGTGTCGTTTTCGGCTGTCTGTAGCAGCTGATGACGAAAATAGACCAGTTGTACCTGTTATGCCTAGAAGAGACAGGGGTAAGTATTTTTGTCTCACAGTGAATTGA 774 0.3992 MDFEHSCDVYPADTNTIISAETFISPSSPEQYFKVEVECKEYFIWDGMSLDSFILPKECGFSNILKQDMEKFVDMLLPYFHVPQHARPSTAAKILACAQHMANVTHKNHKIMGMRVIFTNTTEVYEYEYRLLRRSLEESMDENECPMKANPACKFSFEGLERVNVAEQKEEEGNNSMMAKYCKCTICLEDFSIKPRALRMPCLHLFHSKCLFYWLKVRNTCPLCRFRLSVAADDENRPVVPVMPRRDRGKYFCLTVN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0876 257 ProSiteProfiles Zinc finger RING-type profile. 184 225 IPR001841 -
Mibi06g0876 257 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 111 228 - -
Mibi06g0876 257 SUPERFAMILY RING/U-box 183 236 - -
Mibi06g0876 257 Pfam Ring finger domain 183 225 IPR001841 -
Mibi06g0876 257 SMART ringv_2 183 225 IPR011016 GO:0008270
Mibi06g0876 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 230 IPR013083 -
Mibi06g0876 257 SMART ring_2 184 224 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0876 Mibi-ChrMibi06 27781416 27782189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0876 150 228 C3H Transcription Factor Family AT1G14200 40.506 6.10e-14 66.6