Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0861 ATGAGTAAAAAGAATAAGGCAGCGATAATAGCAGCAGTTTTGGCAGGAGTAATCTGTCTAGGATTATGCGTGTGGCTAGCATGTATATTTCGAAGAAACCGCAATGGAGGCAAGAATGATGATGTACCTATTTTTGTTACAAACAAGAGTAGAGAGTCTTCGGTAGGTGTTACTGGATCCACTGAGTTTAGTTTGGAAGGGAATCAACTGAGTGGGCTAGAATTACCATTGTTCAATTTCAATTGCATTGCCATAGCCACAAACAATTTCTCAGAAGAGAATAAACTTGGACAAGGAGGATTTGGTCCTGTCTACAAGGGAAAGCTTCGAGGTGGAGAAGAAATAGCAGTCAAAAGACTTTCAAGATGTTCAGGCCAAGGATTAGAGGAGTTCAAGAATGAGATGGTACTTATAGCCAAACTTCAACACAGAAATTTGGTTAGACTATTGGGATGTTCCATCCAAGAGGAGGAGAAGTTGCTGGTATATGAATACCAACCAAACAAAAGCTTGGATTACCCAGACGAGCATAAAAGATTAGACTGGAAAAAACGATTTGAAATCATTGAAGGAATTGCAAGAGGGATGCTTTATTTGCACCGGGATTCTAGACTTCGAATCATTCATCGTGACCTAAAAGCAAGCAATATTTTGTTGGATGAAAACATGAATCCTAAAATTTCAGACTTCGGCTTGGCTAGAATATTTGGAGGAAACCAAATGGAAGCCAATACAAATAGAGTAGTTGGCACATATGGTTATATGGCACCAGAATATGCAATGGAAGGTCTATTTTCAGTGAAATCTGATGTTTACAGCTTCGGTGTGTTACTACTTGAGATTGTAAGTGGTAGTAAGAACTCAAGCTTCCGTGATAAAGATGGCTCAAGTCTTGTAGGATATGCATGGCATCTCTGGAATGAAGAGAGAGTGATGGAGCTTGTGGACCCCACAATCCGGGATTTAACACCGAGAAGGAAAGCTTTGAGATGGATACAGATAGGGATGTTGTGTGTGCAGGATTGTGCAGGTGACAGACCAACCATGTCTGATGTGGTTCTGATGTTGGAGACTGAAACAATGGCTCTTCCATGTCCCAAACAACCTCTGGTGATTTGCGTGAGTTCTGAGGATAAACATGTCCATATTGAAGAGCCTCTTGATGCTTCCTCAAATGGTTTGACTATTACAGTTGCCCTAGGCAGATAG 1209 0.4094 MSKKNKAAIIAAVLAGVICLGLCVWLACIFRRNRNGGKNDDVPIFVTNKSRESSVGVTGSTEFSLEGNQLSGLELPLFNFNCIAIATNNFSEENKLGQGGFGPVYKGKLRGGEEIAVKRLSRCSGQGLEEFKNEMVLIAKLQHRNLVRLLGCSIQEEEKLLVYEYQPNKSLDYPDEHKRLDWKKRFEIIEGIARGMLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQMEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGSKNSSFRDKDGSSLVGYAWHLWNEERVMELVDPTIRDLTPRRKALRWIQIGMLCVQDCAGDRPTMSDVVLMLETETMALPCPKQPLVICVSSEDKHVHIEEPLDASSNGLTITVALGR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0861 402 CDD STKc_IRAK 96 357 - -
Mibi06g0861 402 Gene3D Transferase(Phosphotransferase) domain 1 168 363 - -
Mibi06g0861 402 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 372 - -
Mibi06g0861 402 SUPERFAMILY Protein kinase-like (PK-like) 72 370 IPR011009 -
Mibi06g0861 402 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 166 364 - -
Mibi06g0861 402 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Mibi06g0861 402 ProSiteProfiles Protein kinase domain profile. 90 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0861 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mibi06g0861 402 Pfam Protein tyrosine and serine/threonine kinase 93 354 IPR001245 GO:0004672|GO:0006468
Mibi06g0861 402 Gene3D Phosphorylase Kinase; domain 1 56 165 - -
Mibi06g0861 402 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 56 165 - -
Mibi06g0861 402 SMART serkin_6 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0861 Mibi-ChrMibi06 27571325 27573047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0861 9 369 Receptor kinase-like Gene Family AT4G23230 53.005 9.08e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi06g0861 PK_Tyr_Ser-Thr 1.8e-48 CL0016