Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0857 ATGGGATTCAGACATATTCTTAGTTTCATTAATTGTCTCCTCATAATTTCCAGCTTCTGCCTGGCTTTAGTCTCGGCCAAAGATACGATTTTTCCTGGCCACATCATCAGAGATTCCGAGACACTTACCTCAAACAGCAATGACTACATACTAGGATTCTTCAGCCCTCAGAATTCAACTAATCGCTATGTGGGAATCTGGTATCTCTCTCCAGACAACCTCTTCTGGGTGGCTAACAGAGACCAACCAATCAATGATTCTTCTGGGGCACTCACAATTTCCCAGGATGGCAACCTAGTAATATTGAATGGACAAAAACATGTCATCTGGTCGTCAAACGTGTCATACAACAATGGTACAAACACGACAGCCCAGATTCTAGATTCTGGCAACTTTGTCCTCCAAGTGTTTGATAAAATTACTGGAATGAAATCAATATGGCAGAGCTTTGAACATCCAGCTGATGCAGCAATTCCAAACATGAGGATGAGTGCAAACAGATTCACAGGTAAGAAGGTAGAGTTTGTGTCATGGAAAAGCCCTTCTGATCCATCACCTGGATTCTTTTCTGCGAGTCTAGAGCGAATTGCTCTTCCAGAAGTGTTCTTATGGGTCAATAGAACCCGCCCATATTGGCGAACTGGTCCATGGAATGGAAGGGTCTTCATTGGAGCACCACTTATGTCAACTGGGTATTTATATGGATGGTCTCTTCAAAATCAAGATGATGGGACTGTTTATGTGACTTACAGTTTTATTGATAAAGCTGCTTCTGGAATTCTACAATTGAACCCACAAGGCAAGCTTAGATTGGTAAGGTTCTACAACAAGAAGAAATATCTGGATGTGGTTTTGGATCTAAGCGATTGTGATCGCTATGGTATGTGTGGGAACTTTGGGAGCTGTAATCTACAGAACACACCAATATGTAGCTGCTTAAGTGGGTTTGAACCAAAGGTCACAGAGGAATGGAATAGGCAGAATTGGACAAGTGGGTGTGCGAGGAAGTCAGAATTGATGTGTGAGAGCTTGAAGAATGGGAGTAGTAAAGCTGGGGAAGAAGATGGGTTTCTGAGGTTTCAGAATATGAAAGTGCCAGATTTTGCAGAGAGGTCAGGTGTTGACACTGAAGCTCAATGTAGTACTGAGTGCTCCAAGAATTGCTCCTGTTTGGCATATGCTTTCGATGCTGGAATTGGATGCATGTATTGGAGTAAGCCATTGATTGACGTACAAGAATTCAATGATGGAGGAATTGATCTCTATATTCGTGTAGCTCACTCAGAACTTGGAAATGGCTCTGGTAAAAGGTCAAATAAGAGAGAAATCATTGCAGTTACTGTATCGATAGGAACAGTTTTCATGGTTGCATTTGCATGCCTATTAGTCATCTATAACTATCGCTTTCGGAGCAAAATATCTCATAAACAAAAAGAAAATCAGAGTCAAAGAGTGAATGACGCCAATAGACAAGTTAAGTTAGATGAGCTTCCGATATTTGATTTTGAAGAGGTTGCATCTGCTACAAATAACTTTCAATTAGCTAACATGCTAGGGAAGGGTGGTTTTGGTCCAGTTTACAAGGGAACATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTGTCCAGAGCATCCGGACAAGGGCAAGAAGAATTCATGAATGAGGTCTTGGTCATTTCGAAGCTTCAACATCGCAATCTTGTAAAGCTTCTTGGTTGCTGCATTGAAGGAGATGAAAAGATGTTAATTTATGAATTTATGCCAAATAAAAGCTTGGATGCATTTCTCTTTGATCCAATCCAAAGAAAATTGTTAGATTGGAGACAACGGTTTAACATAATTGAAGGAATAGCTCGAGGTTTGCTCTATCTTCATAGAGATTCTAGACTCAAAATCATACACAGAGATTTGAAAGCAAGTAATATCTTGTTGGATGGGGAGATGAATCCAAAAATATCAGACTTCGGTTTAGCAAGAATTTTCGGAGCAAGTGAAGATATGGTTAATACTAAAAGAGTAGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGGAAGGTTTGTTTTCTGAAAAATCCGATGTCTATAGTTTTGGGGTTTTATTGTTGGAGATTGTTAACGGAAGAAGAAACAGTAGCTTCCACACCGATGAAGACTCTCTTAGCCTTATAGGACTTGCATGGAGGTTATGGAATGAAGAGAAAATTATATCTTTAGTAGATCCAGACATATGGGATTCATGCAATGGGGGCCAAATATTGAAGTGCATACACATAGGACTTCTATGTGTTCAAGAAGCAGCAAAAGAAAGGCCAAGCATGACCAATGTGGTTATGATGCTTATAAGTGAGAATGTTCATCTTCCTCCCCCAAAGCAAGTAGCTTTTGTTCATAAGCATTGGGTTTCAAGTTCAGAGTCTTCTAATTCCAAGGAACGTCAACTTAATTCCAACAATAATGTAACTCTTACTGATATTCAAGGTAGATAA 2496 0.3982 MGFRHILSFINCLLIISSFCLALVSAKDTIFPGHIIRDSETLTSNSNDYILGFFSPQNSTNRYVGIWYLSPDNLFWVANRDQPINDSSGALTISQDGNLVILNGQKHVIWSSNVSYNNGTNTTAQILDSGNFVLQVFDKITGMKSIWQSFEHPADAAIPNMRMSANRFTGKKVEFVSWKSPSDPSPGFFSASLERIALPEVFLWVNRTRPYWRTGPWNGRVFIGAPLMSTGYLYGWSLQNQDDGTVYVTYSFIDKAASGILQLNPQGKLRLVRFYNKKKYLDVVLDLSDCDRYGMCGNFGSCNLQNTPICSCLSGFEPKVTEEWNRQNWTSGCARKSELMCESLKNGSSKAGEEDGFLRFQNMKVPDFAERSGVDTEAQCSTECSKNCSCLAYAFDAGIGCMYWSKPLIDVQEFNDGGIDLYIRVAHSELGNGSGKRSNKREIIAVTVSIGTVFMVAFACLLVIYNYRFRSKISHKQKENQSQRVNDANRQVKLDELPIFDFEEVASATNNFQLANMLGKGGFGPVYKGTLQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDAFLFDPIQRKLLDWRQRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDGEMNPKISDFGLARIFGASEDMVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIVNGRRNSSFHTDEDSLSLIGLAWRLWNEEKIISLVDPDIWDSCNGGQILKCIHIGLLCVQEAAKERPSMTNVVMMLISENVHLPPPKQVAFVHKHWVSSSESSNSKERQLNSNNNVTLTDIQGR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0857 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Mibi06g0857 831 SMART serkin_6 512 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0857 831 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544
Mibi06g0857 831 ProSiteProfiles PAN/Apple domain profile. 341 426 IPR003609 -
Mibi06g0857 831 PIRSF SRK 1 831 IPR024171 GO:0004674
Mibi06g0857 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Mibi06g0857 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 184 IPR036426 -
Mibi06g0857 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 588 791 - -
Mibi06g0857 831 Gene3D Transferase(Phosphotransferase) domain 1 588 790 - -
Mibi06g0857 831 CDD STKc_IRAK 518 783 - -
Mibi06g0857 831 CDD PAN_AP_plant 349 426 - -
Mibi06g0857 831 Pfam Protein tyrosine and serine/threonine kinase 513 782 IPR001245 GO:0004672|GO:0006468
Mibi06g0857 831 CDD B_lectin 35 153 IPR001480 -
Mibi06g0857 831 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 775 - -
Mibi06g0857 831 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 587 - -
Mibi06g0857 831 Gene3D Phosphorylase Kinase; domain 1 485 587 - -
Mibi06g0857 831 SMART ntp_6 352 425 IPR003609 -
Mibi06g0857 831 Pfam PAN-like domain 353 411 IPR003609 -
Mibi06g0857 831 ProSiteProfiles Protein kinase domain profile. 512 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0857 831 SMART blect_4 33 153 IPR001480 -
Mibi06g0857 831 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Mibi06g0857 831 MobiDBLite consensus disorder prediction 807 831 - -
Mibi06g0857 831 SUPERFAMILY Protein kinase-like (PK-like) 496 806 IPR011009 -
Mibi06g0857 831 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Mibi06g0857 831 Pfam D-mannose binding lectin 75 179 IPR001480 -
Mibi06g0857 831 Gene3D - 22 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0857 Mibi-ChrMibi06 27550161 27553532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0857 500 798 Receptor kinase-like Gene Family AT4G23140 59.016 4.55e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi06g0857 PK_Tyr_Ser-Thr 2.7e-49 CL0016