Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0851 ATGGGTCAGGAGGAAGTTTTGCCGGATCACCTGCGATGCAAGCGCACCGACGGGAGAAAATGGAGGTGTAGCCGGAGAGTGATGGAAAACGTGAAGCTTTGTGAGATTCACTATCTTCAAGGCCGCCATAGGCAATACAAGGAGAAGGTTCCGGAGTCATTGAAGCTTCAGAGAAAGCGTAAGAATGGGCTTAATAGGGATGACTCTGTTATCAACAATGTCGAACTGAAGGCAAGGAAAGTGGTCAAGATGGCGAAGATGATGAGGAAAAGGATTAAAGTGTCAGATGACGAGAAAAAGGATATGGAAGCTCCTGTGGGGAAGAAGGTGTCCAAGCAGGGTAATAAGCAGTTGGAGTTGATAAGGATGGTGCTGAAGAGAGAGGTTGAGAAAAGGAAGAAGAAGAAGAAGCAAGGAGAGAAGGTGAAGAGGAAGGAGGAGGAGGAGGAGGAGGAAGTAGAGGGATTGTATTACAATGAGGGGGAGTTAACAAAAGAATTGCCCAATGGTTTAATGGCAATTTCTATGGCGTCAACGGCTCAAGAATACTGCAATGTAGGTTCTCAATGTGATGTTAAATTGTGTGGTGATCCTAAGGCAATCACTCCACGTTACTTCAGGTCCAAGAATGTTGAGAGGCTGCAAGCAGGGAAGTTGCAGGCTTTACCAAATGGACGCAAGTGTAAGAGGAAGAAGTGTCATTGGTGTCAAAGAAGTGATTCTTGGAATCTCATAAAGTGTTCAAGCTGTCAAAAAGAGTTTTTCTGCATTGATTGCATTAAAGAACGGTACTTTGATACTCAAGATGAAGTTAAGACAGCATGTCCAGTTTGTCGAGGAACTTGCTCTTGTAAAGACTGCTTGAGAAGTAAATGTAAAGACAATGAAGCTAAGGAGTTTTTGGTCGGTAAAAGCAAAGTTGATAAAATATTGCATTTTCATTATTTGATTTGTACGCTCCTTCCTATACTGAAACAAATAAACGAAGACCTCAATGCTGAGATAGAAGCAGAAGCTAAAATCAGAGGTATAAGACCATCTGATATTCACATCAAGCAAGATGAATTTTGCTGCAATGACCAGACTTACTGCAATCAATGCAAAACACCCATTTTGGATATCCATAGAAGCTGTCCAAGTTGTTCCTATAGCCTTTGCATGAGTTGTTGCAGGCAATCGTGTCGAAGCAACTCCTTTGAAGAAAGTAATACATCTATTTCTGAGTCATCTGATGCGATGGATGCATGTCTTGCCAGCGAAAATCATCTTTTGGATAAGAAGGCCGACGCCAACGGCAATTCGGTTGCCACTTTTTCATTGCATAAATGCACAAACTATGATGGTACCGACAATGTATCTTGTCCTCCAAAAGAACTAGGTGGTTGTGGTGATAATTTTCTTGAATTAAGGTGTGTTTTTCCTTTAAGTCGGATCAAGGAGATGGAAGTAACAGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACATTGGACAAAAGTTCAAGCTGCTCATTGTGTCCAGACACGGATAATAAACTTGATGGATTTAAGCAGTTACAAGAAGCAGCTCTTAGAGAAGATTCAAAAGACAATTGGCTGCTTTATCCTACTGTTTTGGAGGCTGGTAGTGATAACTTTGAACACTTTCAGAAGCACTGGGGTAAAGGCCATCCTGTAGTGGTACGAGATGTGCTCCGAAATACATCAAACCTCAGTTGGGATCCACTGAACATGTTCTGTACTTTTCTTGAGGGTAGCATCTCAAGATATGAGAAGGACAAGGATGAACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAATATTAGGCAGTATTTTACTGGATCTTTTAAATGTCAGCCACAGAAAAACATGTGGCATGAGATGCTGAAATTGAAGTGGTTACTGTCTTCCCAACTATTCAAAGAATGGTTTCCAGCTCATTTTGCTGAAGTAATTGATGCTCTACCACTTCAAGAATACATGAATCCTACATCTGGTTTTCTGAATTTAGCTATAAATCTGGCCCAGGGGAGTGCAAAGCATGACCTAGGACCATATATCTATCTTTCATATGGCTGTGGTGATGAACAGAGTGACTTCGCTACAAAATTGTCTTATGAGTCATATGATGTGGTTAATATTATGGCTCACACCACGGATGTCCCTATCTCTACAGAACAGCTGAGTAAAATAAGGAAGCTGTTGAAAAGGCACCGAAGTCTGTGTCGAAGGGATTCTTCTGAAATTAGTGCTGATCAATTAAAGGAACAAGGAGAGAAAGTAAATTCATTACTGCCAGATTCTTCAGACTTTGAAAAGACCGAGTTGCATAGAAAGGAGAGAGAAGAAAAGCATTTTTTCAGGAGAGTCAACAGAATAGCTTCCATAGTTACTGAAGCAATAGATGCAACTCATCAAAATACAGACAGCAAAATTTCCCTTGATGAAGAATGTGATTCTGATTCTGATTCTGAAAATCACTATGGGAGTTTAAATAATGATAGAAATGAAAAGTTTATCAAACATTCTGGTGCTCAGTGGGATGTCTTCCGCAGACAAGATGTTCCAAAGCTCTTGGAATACCTTAAAAGACACTCTGCTGAATTTTCTTCTTCCGAAGACAATCACAAGCAGGTAGATCATCCACTCTTAGATCAGAACTTCTTTCTTGACAACACTCACAAGATGAGGCTCAAGGAGGAATACAAAATTGAACCATGGACTTTTGAGCAACATGTCGGCGAAGCTGTTATTATTCCATCTGGATATCCATACCAGATTAGAAATTCTAAGTGTTGTGTTAATGTAGTATTGGAATTTGTTTCCCCTGAGAATGTGGCCGAGTGTATCCAATTGATCGACGAAGCACGTCAGCTTCCAGAAGATCACAAAGCAAAAGTTGACCATCTTGGGGTGAAGAAAATGGCTCTTTATAGCATTGATTCAGCAATAAAGGAGATACGTGAACTTACCTCCAAAACGTGA 2994 0.4058 MGQEEVLPDHLRCKRTDGRKWRCSRRVMENVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKNGLNRDDSVINNVELKARKVVKMAKMMRKRIKVSDDEKKDMEAPVGKKVSKQGNKQLELIRMVLKREVEKRKKKKKQGEKVKRKEEEEEEEVEGLYYNEGELTKELPNGLMAISMASTAQEYCNVGSQCDVKLCGDPKAITPRYFRSKNVERLQAGKLQALPNGRKCKRKKCHWCQRSDSWNLIKCSSCQKEFFCIDCIKERYFDTQDEVKTACPVCRGTCSCKDCLRSKCKDNEAKEFLVGKSKVDKILHFHYLICTLLPILKQINEDLNAEIEAEAKIRGIRPSDIHIKQDEFCCNDQTYCNQCKTPILDIHRSCPSCSYSLCMSCCRQSCRSNSFEESNTSISESSDAMDACLASENHLLDKKADANGNSVATFSLHKCTNYDGTDNVSCPPKELGGCGDNFLELRCVFPLSRIKEMEVTAEEIVCSYDFPETLDKSSSCSLCPDTDNKLDGFKQLQEAALREDSKDNWLLYPTVLEAGSDNFEHFQKHWGKGHPVVVRDVLRNTSNLSWDPLNMFCTFLEGSISRYEKDKDELEACLDWCEVEINIRQYFTGSFKCQPQKNMWHEMLKLKWLLSSQLFKEWFPAHFAEVIDALPLQEYMNPTSGFLNLAINLAQGSAKHDLGPYIYLSYGCGDEQSDFATKLSYESYDVVNIMAHTTDVPISTEQLSKIRKLLKRHRSLCRRDSSEISADQLKEQGEKVNSLLPDSSDFEKTELHRKEREEKHFFRRVNRIASIVTEAIDATHQNTDSKISLDEECDSDSDSENHYGSLNNDRNEKFIKHSGAQWDVFRRQDVPKLLEYLKRHSAEFSSSEDNHKQVDHPLLDQNFFLDNTHKMRLKEEYKIEPWTFEQHVGEAVIIPSGYPYQIRNSKCCVNVVLEFVSPENVAECIQLIDEARQLPEDHKAKVDHLGVKKMALYSIDSAIKEIRELTSKT 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0851 997 SUPERFAMILY Clavaminate synthase-like 546 984 - -
Mibi06g0851 997 Pfam JmjC domain, hydroxylase 846 943 IPR003347 -
Mibi06g0851 997 SMART cupin_9 647 960 IPR003347 -
Mibi06g0851 997 ProSiteProfiles JmjC domain profile. 666 960 IPR003347 -
Mibi06g0851 997 Gene3D Cupin 538 969 - -
Mibi06g0851 997 Pfam WRC 8 49 IPR014977 -
Mibi06g0851 997 MobiDBLite consensus disorder prediction 814 837 - -
Mibi06g0851 997 ProSiteProfiles Zinc finger RING-type profile. 233 279 IPR001841 -
Mibi06g0851 997 Coils Coil 132 152 - -
Mibi06g0851 997 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 996 IPR045109 GO:0032454|GO:0033169
Mibi06g0851 997 ProSiteProfiles WRC domain profile. 7 53 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0851 Mibi-ChrMibi06 27493142 27500770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0851 8 47 GRF Transcription Factor Family AT2G22840 55.000 9.55e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi06g0851 JmjC 9.5e-11 CL0029