Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0847 ATGGGAAGATCACCTTGTTGTGACAAAAGTGGGCTAAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAACTCATCGATTACATCCAGAAACATGGCTATGGCAACTGGAGGACTCTTCCCAAGAATGCTGGGCTGCAGAGATGTGGAAAGAGTTGCCGTCTGCGTTGGACCAACTATCTCCGACCAGACATCAAACGAGGTCGTTTCTCCTTCGAAGAGGAAGAGACCATCATTCAGCTCCACAGCATTCTCGGCAACAAGTGGTCCGCGATTGCTTCGCGTTTGCCAGGAAGAACAGATAATGAGATCAAGAACTACTGGAACACTCACATTCGTAAGAGGCTTCTTCGCATGGGGATTGATCCTGTGACTCACTCCCCACGCTTAGACCTTTTAGACCTCTCTTCCATTCTCTATGCTTCTTCATCTTCATCTTCCTCATCCACACAAGATATCTCAAACCTTCAACTTGGTGGCCTCCAATCTCCTTTACTTAACCCACACCTCCTCAAGCTTGCTTCTTCTCTCCTCTCATCTCAACGTAGAGACCACCAAAACCTAAACTTGTGTCACCAACAAATCCCAGAAAATGACACTCTCTTTCACCAAATGGCTTTACCTGAAATATCTCATCCAACTATAATGGACCAACCCAATGTGGATCCCTATAATATTCCCTCAAATTTCTCTGAGTTTGGAGATTGGCAAAACAACAACAATTGTAATAATGGTGGCATGATGGTTTCTACACAGGACTATGTCCCTGACTTGTTACCCACCAGCTTCCAATATTATAGTTCCGATGAAAATCAGTATCAGAATCTTGTGGACCTTCAGAATATCAATCATAACAATGATAATAACAACTTTGGTTTGGCCTCAGTTCAATCCACGCCATCAAATTCGAATTCAACGTACATCAATGGCAGCAGTACGACGGAGGATGAGAGGGAGAGCTATAACAGCAGCAACATGTTCAACTTTGAAATCCCTGCTGATATTTTGGATGTCAATGATTTCATGTAA 1029 0.4373 MGRSPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILYASSSSSSSSTQDISNLQLGGLQSPLLNPHLLKLASSLLSSQRRDHQNLNLCHQQIPENDTLFHQMALPEISHPTIMDQPNVDPYNIPSNFSEFGDWQNNNNCNNGGMMVSTQDYVPDLLPTSFQYYSSDENQYQNLVDLQNINHNNDNNNFGLASVQSTPSNSNSTYINGSSTTEDERESYNSSNMFNFEIPADILDVNDFM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0847 342 FunFam MYB-related transcription factor 13 66 - -
Mibi06g0847 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi06g0847 342 Gene3D - 13 66 - -
Mibi06g0847 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi06g0847 342 MobiDBLite consensus disorder prediction 295 321 - -
Mibi06g0847 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi06g0847 342 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi06g0847 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi06g0847 342 SMART sant 66 114 IPR001005 -
Mibi06g0847 342 SMART sant 13 63 IPR001005 -
Mibi06g0847 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 280 - -
Mibi06g0847 342 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi06g0847 342 CDD SANT 16 61 IPR001005 -
Mibi06g0847 342 FunFam Transcription factor MYB39 69 130 - -
Mibi06g0847 342 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi06g0847 342 Gene3D - 69 116 - -
Mibi06g0847 342 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0847 Mibi-ChrMibi06 27451469 27452747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0847 1 342 MYB Transcription Factor Family AT4G21440 55.056 3.59e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g0847 Myb_DNA-binding 1.6e-16 CL0123