Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0812 ATGTTGGAGACGTTGATACATATTGTGCATGCTGCTTTGGAAGCACTTTCTGAGAAATGTTTTGGTTTGAATCAGGAAATAATAGAGGATCCTACCTTTCTTCATGAATGGCACTTGAACTCTCTGGGTGATCCAAGCTTACTGCCACTAGCTGCAGCTTTTGGAGATACCTTTGAAAGGCCCGAGAAACAGCCCAAAGTCAACACAATTGGTCAGAATCAGACATTAGACACAAGCTATGATTCATGTTCCAATAATCTTCTTTCCTTTGTCAATTCTTCAAGTTACATGAGCCAATTGGGAACATTAAAGCCTTATAAGGAGCAGATACCATGTCCTGAATTCAACAGCACAAACCCTTCTTCAGACATGTTGGCCTCTCATGGTGGATCCTTGGGAAATCAGAACTTACTTGTCTTCAATGCCAGCCAAGATCCCAAAAAGAATATTGGAACAAGTCCTAAACTTTCTCAGCCTCAAGACCACATAATCGCCGAAAGAAAGCGGCGAGAAAAGCTCTCCCAGCGCTTCATTGCTCTATCTGCTCTTGTCCCTGGCCTTAAAAAGACGGACAAGGCTTCTGTTCTTGGGGATGCTATAAAGTATTTGAAGCAATTGCAAGAGAGAGTGAAGGTCCTTGAAGAGGAACAGAGTAGAAGGAGCACTGTGGAATCAGTGGTGGTTGTGAAGAAAACTCAATTATTATTAGCTGATGAAGGAGAAGATTTTTCTTCAGACTCTGGCGAATGGCATGAGGAACCATTACCAGAAATTGAAGCTAGATTTTGTGAGAGAAACGTCCTCATAAGAATTCACTGTGAGAAAATAACAGGAGTGATAGAGAAAGCAGTGAGTGAGATAGAGAGACTTCATCTAATAGTCACAAGTACCAGTGTCATGACTTTTGGCAATTCTGCTCTTGATATAACCATCATTGCTCAGATGGGTAAGGAATTTAGCTTGAAAGTGAAGGAGCTTATAAGAAGTCTACGCTCAGCTTTTGAATCTTTCATGTGA 1017 0.413 MLETLIHIVHAALEALSEKCFGLNQEIIEDPTFLHEWHLNSLGDPSLLPLAAAFGDTFERPEKQPKVNTIGQNQTLDTSYDSCSNNLLSFVNSSSYMSQLGTLKPYKEQIPCPEFNSTNPSSDMLASHGGSLGNQNLLVFNASQDPKKNIGTSPKLSQPQDHIIAERKRREKLSQRFIALSALVPGLKKTDKASVLGDAIKYLKQLQERVKVLEEEQSRRSTVESVVVVKKTQLLLADEGEDFSSDSGEWHEEPLPEIEARFCERNVLIRIHCEKITGVIEKAVSEIERLHLIVTSTSVMTFGNSALDITIIAQMGKEFSLKVKELIRSLRSAFESFM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0812 338 CDD bHLH_AtNAI1_like 160 231 - -
Mibi06g0812 338 Gene3D - 157 230 IPR036638 GO:0046983
Mibi06g0812 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 219 IPR036638 GO:0046983
Mibi06g0812 338 Coils Coil 196 216 - -
Mibi06g0812 338 PANTHER BHLH TRANSCRIPTION FACTOR 66 334 - -
Mibi06g0812 338 SMART finulus 163 212 IPR011598 GO:0046983
Mibi06g0812 338 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Mibi06g0812 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0812 Mibi-ChrMibi06 26927608 26930707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0812 157 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 55.191 5.95e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g0812 HLH 2.3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0812 06 26927608 26930707 Mibi06g0812 06 26927608 26930707 CCT
Mibi06g0812 06 26927608 26930707 Mibi06g0812 06 26927608 26930707 ECH