LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g0809	ATGGCTTCTTCTGATGATGATTCCTTTCTTCTACGACGCTTTCGCTTTCCCTATAACTTCCAATTCTCACTCTTTGGACGTGATTACTTCCCCTCCTCAAATGAGCTTCTTCCAGTGGAATTTCATTCCTGCTTCACAAATATGTTGGAGTCTTTAGCTTATTGCCGAAGCTTTAAGGGACATGGTATTACCAAACACAACAGTTCAATCTGGACTCACCCTCAAGCTATTTACCAAATTCGTAGAAGTGCTATTTCCACACTATGTTCATATGACAAGAGAGGGGCACCACTATCACATGGCTTTGGTCATAAGATATGTCACGGAAATTCCGGGTCGGAAATGTTCTGTGACACAACTTTCATTGCTCCCACATTATCGTGTTGGAAAGGACTCTATTTCTCAAGGTATAGGCAATTACGTTGGCAACGGTTTAGGGCAAGTGTGGCATATGATGTTGCTGGTGCTGTTGAAGTAATGAATGATCTAGGATCGGATACTCTTACATTCTTGGCTGTGACTGTGTTAATTGTGCCCACATTCAAGTTAATGAAAGCCAGTCCTATACTTGGTTTCTTTTTTGCTGGTGTGGTACTCAATCAGTTTGGCTTAATAAGAAATATTACAGATGTGAAAGTTTTGTCTGAGTGGGGAATCCTTTTCCTGCTGTTTGAGATGGGTTTGGAGCTTTCACTCGCACGTCTGAAAGCTCTTGCTAAATATGCCTTTGGGATGGGACTGGCTCAGGTTGTATTATCTACTCTAGCATTTACTTCTTTTGAACTTCCACCTAATGGGGCTATTGGAACAAAAATTTTGGTGTTCCTTTTCCACTCAAGGCCTGATCTGGTGAACATTAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCACTGTCTTCCTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAACTTCCTACAAGATTTGGTTCAGCAACTTTGGGAATTCTTCTTTTACAGGACATAGCTGTTGTCCCTCTGTTAGTCATTCTCCCTATATTGGAGAGCCAGAATCTGGCTGAGGAAAGTATTTGGCCAATGCTTGCTCAAGAAAGTTTAAAAGCGTTGGGTGGATTGGGTCTTCTTTCTCTTGGGGGAAAGTACATTCTGAGAAGAGTTTTTGAGGTTGTTGCAGATGCAAGGAGCCCAGAGGCTTTTGTTGCTCTTTGCTTGATGACCATTGCTGGAACTTCACTAGTTACGCAGAAGTTGGGGTTTAGTGATTCGCTTGGAGCTTTTTTAGCTGGAGCACTCTTGGCAGAGACAAATTTTAGGACACAAATTGAAGCAGACATAAGACCGTTTAGAGGCTTACTTCTTGGTTTATTTTTTCTTACTACTGGGACTTCCATTGACATGCAGCTCCTTTTCCGAGAGTGGCCAAATGTACTTTCACTCTTGGCAGGTTTAATTGTTATCAAAACATTAATTATTACAGCTATTGGGCCTCGTGTGGGGCTTACTTTACAAGAGAGTGTAAGAATAGGATTGCTTCTTTCCCAAGGAGGCGAGTTTGGATTTGTTGTGTTCTCTTTAGCTAATGGGCTTGGAGTTCTGCCACTTGAGCTCAACAAGTTGCTCATAATTGTTGTTGTCTTGTCAATGGCATTAACCCCTCTTCTTAATGAAGCTGGAAGAAGGGCTGCTCATTTTCTTGATGACAAATTTGATGCTGAAAATAAAGCTTTAGAGATGGTAAATTTCGATGCCAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCCAATCTCCTGTCCAACCCATTGGCTTCAGGAGGAGACGGTGATGCTATAGGATGGCCTTATGTAGCTTTTGATCTTGACCCAACAGTAGTAAGGGCAGCTAGAAAACTTGGTTTTCCAATTCTTTTTGGGGATGGCTCACGCCCAGCTGTTCTTCAGTCTGCTGGTATCTCTTCTCCTAAGGCTATAATAATTATGTATGCTGGGAAGGAAAAAACTACTGAATCCGTGCAGAGGCTACGATTCACTTTCCCTACTATTCCCATTTATGCTAGAGCTCAAGATCTCAAGCATCTTTTAGATCTGAAGAAAGCCGGCGCAACAGATGCCATTTTGGAAAATGCAGAGACTAGCTTACAGCTTGGTTCTAAGCTTCTGAAAGATCTCGGCGTGATGTCTGATGATATATCATTTCTGAGACAGCTTATTCGAGACTCCATGGAGCTACAAGCTCAAGAAGCTCTCAGCCAATCTGAATATGGTGAATTAGATATGATGAAACCACTGCAGGTGAGAGTTGATGATTTGATGGAGACACGTGAACCTATGGCGACAACTTCACCAGAGTATGAATTATCAGAATTGAACCAGACAGATAAAGCTGTGCTGGGTAAAATACAGACCGAAGAAGATTCTGATGAACAAGGTTTTGATCCTATGGAATCTGTGAGCTTAGAAGGACATGGTGTCCTATATAGTAAAGAAGGTGCTGAGGAAAGCTCAGTTGCTGGATACCCAGAAACTTTGGGAGAGAAGAATCTGGTGGACCCATCAATCCCTATGCAAACAGCCATGGATGAGCCCTAA	2601	0.4237	MASSDDDSFLLRRFRFPYNFQFSLFGRDYFPSSNELLPVEFHSCFTNMLESLAYCRSFKGHGITKHNSSIWTHPQAIYQIRRSAISTLCSYDKRGAPLSHGFGHKICHGNSGSEMFCDTTFIAPTLSCWKGLYFSRYRQLRWQRFRASVAYDVAGAVEVMNDLGSDTLTFLAVTVLIVPTFKLMKASPILGFFFAGVVLNQFGLIRNITDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTSFELPPNGAIGTKILVFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLAEESIWPMLAQESLKALGGLGLLSLGGKYILRRVFEVVADARSPEAFVALCLMTIAGTSLVTQKLGFSDSLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLFREWPNVLSLLAGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANGLGVLPLELNKLLIIVVVLSMALTPLLNEAGRRAAHFLDDKFDAENKALEMVNFDASEPVVILGFGQMGQVLANLLSNPLASGGDGDAIGWPYVAFDLDPTVVRAARKLGFPILFGDGSRPAVLQSAGISSPKAIIIMYAGKEKTTESVQRLRFTFPTIPIYARAQDLKHLLDLKKAGATDAILENAETSLQLGSKLLKDLGVMSDDISFLRQLIRDSMELQAQEALSQSEYGELDMMKPLQVRVDDLMETREPMATTSPEYELSELNQTDKAVLGKIQTEEDSDEQGFDPMESVSLEGHGVLYSKEGAEESSVAGYPETLGEKNLVDPSIPMQTAMDEP	866

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g0809	866	MobiDBLite	consensus disorder prediction	834	866	-	-
	Mibi06g0809	866	Pfam	Sodium/hydrogen exchanger family	169	554	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Mibi06g0809	866	ProSiteProfiles	RCK N-terminal domain profile.	585	717	IPR003148	GO:0006813
	Mibi06g0809	866	Gene3D	-	165	561	IPR038770	-
	Mibi06g0809	866	FunFam	K(+) efflux antiporter 3, chloroplastic	162	561	-	-
	Mibi06g0809	866	Gene3D	-	583	754	-	-
	Mibi06g0809	866	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	143	786	-	-
	Mibi06g0809	866	Pfam	TrkA-N domain	586	709	IPR003148	GO:0006813
	Mibi06g0809	866	FunFam	Glutathione-regulated potassium-efflux system protein KefB	583	755	-	-
	Mibi06g0809	866	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	584	728	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g0809	Mibi-ChrMibi06	26860132	26870032	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g0809	44	774	Inorganic Solute Cotransporters	AT4G04850	71.995	0.0	995