Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0798 ATGCTTCCCCACTCGCAGTCATTCACTCTCTTTCACCCGCTTCGTTCTGAGCGACACGTCAAAGAGGGAAGATTTGGAAGTGAAAACCCTAGAGGGAAGATAGCGATTAGGAGGATAGAGAATTCGACGAGTAGGCAAGTGACTTTCTCAAAGAGAAGGAATGGATTGTTGAAGAAAGCAAGAGAGCTTTCTGTTCTTTGTGATGCTGAAGTTGGATTGATCGTTTTCTCCAGCACTGGCAAGCTCTATGACTTTGCAAGCTCCAGCATGAAATCTGTGATTGAGCGATACAACAAGCTTAAAGAGGAACATCTGATGCTTATGAATCCTGCTTCTGAAGTCAAGCTTTGGCAGAGAGAAGTAGCAAGCCTGAGGCAACAGCTACAGTACTTGCAAGATTATCACAGGCAACTCATGGGCGAAGAACTTTCTGGTTTGGGAATTAAAGAACTACAAAATCTGGAAAACCAACTAGAGATGAGCTTGAAAGGTGTCCGCATAAGGAAGGATCAAATTTTAAATGACAAGATTAAAGAACTGCATCAACAGGGGAAACACATTCATGAAGAAAATGAACAACTTCACAAAAAGCTAGAGATCATCCAGAAGGAAAATGAAGAGCTGAGAAAGAAGGTCTACGAAGCACAAAGCATGAATGAAGAGAACGGAACATCCAATCCTTCAATCACTATAAGCAACGGATATGATTTACATGCACCAATCTGCCTCCAGCTAAGCCAGCCGCAGTCTCAATACAATGAACCACCAACCAAAACAATGAAACCGGGATTACAGCAGCCTAAGCAGAAGCAAGTTGACAATCAGGGTTGGTTATCTGACAACAAGCTCTCAACAACCAGGTCCTGA 867 0.4291 MLPHSQSFTLFHPLRSERHVKEGRFGSENPRGKIAIRRIENSTSRQVTFSKRRNGLLKKARELSVLCDAEVGLIVFSSTGKLYDFASSSMKSVIERYNKLKEEHLMLMNPASEVKLWQREVASLRQQLQYLQDYHRQLMGEELSGLGIKELQNLENQLEMSLKGVRIRKDQILNDKIKELHQQGKHIHEENEQLHKKLEIIQKENEELRKKVYEAQSMNEENGTSNPSITISNGYDLHAPICLQLSQPQSQYNEPPTKTMKPGLQQPKQKQVDNQGWLSDNKLSTTRS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0798 288 PRINTS MADS domain signature 51 66 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 PRINTS MADS domain signature 66 87 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 PRINTS MADS domain signature 31 51 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 ProSiteProfiles K-box domain profile. 114 204 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mibi06g0798 288 SMART madsneu2 29 88 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 ProSitePatterns MADS-box domain signature. 31 85 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 Gene3D - 41 111 IPR036879 GO:0003677|GO:0046983
Mibi06g0798 288 CDD MADS_MEF2_like 31 105 IPR033896 GO:0000977|GO:0045944
Mibi06g0798 288 PANTHER SERUM RESPONSE FACTOR HOMOLOG 31 222 - -
Mibi06g0798 288 FunFam MADS-box transcription factor MADS-MC 41 113 - -
Mibi06g0798 288 ProSiteProfiles MADS-box domain profile. 29 89 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 Coils Coil 148 168 - -
Mibi06g0798 288 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 38 85 IPR002100 GO:0003677|GO:0046983
Mibi06g0798 288 Pfam K-box region 112 198 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mibi06g0798 288 SUPERFAMILY SRF-like 31 119 IPR036879 GO:0003677|GO:0046983
Mibi06g0798 288 Coils Coil 187 221 - -
Mibi06g0798 288 MobiDBLite consensus disorder prediction 248 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0798 Mibi-ChrMibi06 26648030 26662125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0798 31 264 MADS-box Gene Family AT2G14210 59.574 6.91e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mibi06g0798 K-box 9.1e-26 No_clan