Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0795 ATGATTACAACCCTTTCACACTTCCTTGGAAGTATACTCCCTCGCTTAAAATGTGTTTGCTTTCCATCTTATCAGTTTGATTTTTTTTCAAATCTTCACCTTCACGCCAAGTCTTCCACATTGCAGGCTAATGCAGTGTTGTGCAGCTTCAAATCAAATGTGAACACCATATCTGACATAGCAAAAAATGAAGAAATAATGGCCGCAAAATACAGAGAAGGTGGATCATCTCCTCATACTTTTAAATCTAAGAATTTTCAGAAAGAGTGGACTTGTGCCATATGCCAGGTGACAACAACTTGCGAGGCTAATTTGAATAGTCACTTGCATGGGAGGTCGCATAAGGCGGCTTGCAAAGCACTGGAAGCGAAAAACTTGTCTTTTACCGTGGAAGTATACATGAAGAAGAATGACAAGTCAGGTGGAGAATCAGAGAAGATAATGATCAGTACTTCAGATTCAATAGAACAGAAGATCACAACGTGTCATCCAAAAACGGAGCAGAAGAATGTTGGAGTTGTTAATGGGCTAAAATATTATTATAGGCCGAAGGGGACTATTGATCAGGAAAACATGAGCAAAAGTGTCGATGTCATTCCCAAGGTGCAAGAATTGCAGAAGAACTCGGGAACATCAGTACTTGAAATGAGCAGCTCCAGATTCAGATGTGATATGTGTGATGTAAATTGCAGTAGTGAAATTGTCATGACCTCTCACTTGAAGGGTAGGAGGCACTTGGTCCAAAGTCAATTGGTCCCGGTTAGAAAATGA 771 0.4034 MITTLSHFLGSILPRLKCVCFPSYQFDFFSNLHLHAKSSTLQANAVLCSFKSNVNTISDIAKNEEIMAAKYREGGSSPHTFKSKNFQKEWTCAICQVTTTCEANLNSHLHGRSHKAACKALEAKNLSFTVEVYMKKNDKSGGESEKIMISTSDSIEQKITTCHPKTEQKNVGVVNGLKYYYRPKGTIDQENMSKSVDVIPKVQELQKNSGTSVLEMSSSRFRCDMCDVNCSSEIVMTSHLKGRRHLVQSQLVPVRK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0795 256 SUPERFAMILY beta-beta-alpha zinc fingers 82 125 IPR036236 -
Mibi06g0795 256 SUPERFAMILY beta-beta-alpha zinc fingers 209 248 IPR036236 -
Mibi06g0795 256 SMART c2h2final6 221 245 IPR013087 -
Mibi06g0795 256 SMART c2h2final6 90 114 IPR013087 -
Mibi06g0795 256 Pfam Zinc-finger of C2H2 type 221 245 - -
Mibi06g0795 256 Pfam Zinc-finger of C2H2 type 90 114 - -
Mibi06g0795 256 Gene3D Classic Zinc Finger 75 120 - -
Mibi06g0795 256 Gene3D Classic Zinc Finger 200 251 - -
Mibi06g0795 256 ProSitePatterns Zinc finger C2H2 type domain signature. 223 245 IPR013087 -
Mibi06g0795 256 PANTHER OS06G0651300 PROTEIN-RELATED 73 246 - -
Mibi06g0795 256 SMART ZnF_U1_5 87 121 IPR003604 GO:0003676|GO:0008270
Mibi06g0795 256 SMART ZnF_U1_5 218 252 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0795 Mibi-ChrMibi06 26609809 26610579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0795 89 245 C2H2 Transcription Factor Family AT5G61190 27.389 4.44e-08 52.0