Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0792 ATGGAACAGAAAGACATCAAAGATTTGGAGATGATTGATAAAGAGGAAGTTTGTGAAGGCAAGCAACTCAATGCCAAGTTTTCAACATTGCAGGATAATGCAGCCTTGGATAGCCTCAAATCAAAAGAAAGCGCTTCATCTGCCATGGCGAAAGCAGAAAATATGCCAGCAGACACAGAACATGGAACACATGCTAAGATTTCTGCAGCAGAGAATGTACAGAAAGAGTGGACATGTGCCATATGCCAGTTGACAATGCCTTCTGAAGCCAATTTGAATTCCCACTTGCAAGGAAGGAAACATAAAGCTGCTTGTGAAGCACTGAACATAATGAAAATTAAAGCAGCACTGATGAAAAACACAGGAACCAAAGCGTCTCCTCAGGTTTCTGCATCTGCCATGGCGAAAGCAGAAAATATGCCAACAGACACAGCAGACGCAGAACATGGAACACATGCTAAGATTTCTGCAGCAGAGAATGCACAGAAAGAGTGGACATGTGCCATATGCCAGTTGACAATGCCTTCTGAAGCCAATTTGAATTCCCACCTGCAAGGAAGGAAACATAAGGCTGCTTGTGAAGAACTTAATACAACAAAAACTATAGCGGCAACGATGAAAAACACAGGAATCAGAGCATGTCCTGAGGTTTCTGCATCTAAAAATGCACAGAACATGTACACTTGTGTTGTATGTCAGTTGACTAAGCTAACTATGGATAATATTAAGACCCACCTGAATGGGAAGAAGCATAAGGCTGCTTGTGAAGCATTGTATGGGAAAAGCCAAGGTGTTTCTGAGAAAGGTTTGCTGAAGAAGAATGGTAACTCCATTGGGGAACAAGAGAAGATAATTATCAATACGACTACTTCAAATGTAACATTAGACCAGAAGAATATCACAAACAAACATCATCCAAAAATGGAGCATAACAATAATATTAATCAGCAGAAGAACCTAGGAAAACCAGTACTTGAAATGAACAGTTGCAGATTCAGATGTGATATGTGTGATGTAAATTGCACTTGGGAAGGTGACTTGGCTTCTCACTTACAGGGTAAGAAGCACTTGGCTCAAATTCAATTACTTAGTGGTTCTATCTAG 1104 0.4049 MEQKDIKDLEMIDKEEVCEGKQLNAKFSTLQDNAALDSLKSKESASSAMAKAENMPADTEHGTHAKISAAENVQKEWTCAICQLTMPSEANLNSHLQGRKHKAACEALNIMKIKAALMKNTGTKASPQVSASAMAKAENMPTDTADAEHGTHAKISAAENAQKEWTCAICQLTMPSEANLNSHLQGRKHKAACEELNTTKTIAATMKNTGIRACPEVSASKNAQNMYTCVVCQLTKLTMDNIKTHLNGKKHKAACEALYGKSQGVSEKGLLKKNGNSIGEQEKIIINTTTSNVTLDQKNITNKHHPKMEHNNNINQQKNLGKPVLEMNSCRFRCDMCDVNCTWEGDLASHLQGKKHLAQIQLLSGSI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0792 367 SMART c2h2final6 332 356 IPR013087 -
Mibi06g0792 367 SMART c2h2final6 165 189 IPR013087 -
Mibi06g0792 367 SMART c2h2final6 227 251 IPR013087 -
Mibi06g0792 367 SMART c2h2final6 77 101 IPR013087 -
Mibi06g0792 367 PANTHER OS06G0651300 PROTEIN-RELATED 211 364 - -
Mibi06g0792 367 SUPERFAMILY beta-beta-alpha zinc fingers 319 363 IPR036236 -
Mibi06g0792 367 Gene3D Classic Zinc Finger 141 195 - -
Mibi06g0792 367 Gene3D Classic Zinc Finger 307 362 - -
Mibi06g0792 367 Gene3D Classic Zinc Finger 55 107 - -
Mibi06g0792 367 Pfam Zinc-finger of C2H2 type 332 356 - -
Mibi06g0792 367 Pfam Zinc-finger of C2H2 type 165 189 - -
Mibi06g0792 367 Pfam Zinc-finger of C2H2 type 77 101 - -
Mibi06g0792 367 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Mibi06g0792 367 SUPERFAMILY beta-beta-alpha zinc fingers 67 110 IPR036236 -
Mibi06g0792 367 SUPERFAMILY beta-beta-alpha zinc fingers 216 258 IPR036236 -
Mibi06g0792 367 SUPERFAMILY beta-beta-alpha zinc fingers 157 197 IPR036236 -
Mibi06g0792 367 SMART ZnF_U1_5 162 196 IPR003604 GO:0003676|GO:0008270
Mibi06g0792 367 SMART ZnF_U1_5 329 363 IPR003604 GO:0003676|GO:0008270
Mibi06g0792 367 SMART ZnF_U1_5 224 258 IPR003604 GO:0003676|GO:0008270
Mibi06g0792 367 SMART ZnF_U1_5 74 108 IPR003604 GO:0003676|GO:0008270
Mibi06g0792 367 ProSitePatterns Zinc finger C2H2 type domain signature. 167 189 IPR013087 -
Mibi06g0792 367 ProSitePatterns Zinc finger C2H2 type domain signature. 334 356 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0792 Mibi-ChrMibi06 26598421 26599956 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0792 70 292 C2H2 Transcription Factor Family AT2G19380 21.757 6.93e-10 58.5