Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0786 ATGATTGTCGCCTTCCTCGTGATACCTGACTTTGGAAGAGCTGCTCATGTCTATAATCACCTCATTCAGTCATGCATCTACATGAATCCAAAAGAAGTCATTAGCAGATTCAGGAACTGGAAAAACATATTTGCCAAGAAACAGGACTTTATAATGCAGGTTGAGAATTATATAGCACAGAATGGAACTGAAGCCTTTGAGAAACTCATCGCTAGCAAGAACACAGAGCAAAGTCTTCTTCATGCAGAAACTAGGAAAGCAGTTCCAAGAACTACAGAGAAGAATGAGATCCTGAAGCTCAATGCCAAGTTTCCAACATTGCAGCATAATGCAGCCTTGGATAGCCTCAAATCAAAAGAAAGAACTTCATCTTTCATGGCGAAAACAGAAAATATGCCAGCAGACACAGAACATGGAACACATGCTAAGATTTCTGCAGCAGAGAATGTACAGAAAGAGTGGACATGTGCCGTATGCCAGTTGACAATGTCTTCTGAAGCCAAGTTGAATTTCCACTTGCAAGGAAGGAAACATAAAGCTGCTTGTGAAGCTCTGAACACGATGAAAACTAAAGCAGCACCGATGAAAAACACGAAAACCAGAGCGTCTTCTCAGGCTTCCTCATCTAAAAATGCACAGAACACGTTTACTTGTGTTGTTTGTCAGATGACAAAGCTATCTAAGGATAATATGAAGTCCCACCTGAAAGGGAAGAAGCATAAGGCTGCTTGTGAAGCATTGAATGGGAAAAGCCAAGGTGTTTATGAGAAAGGCTTGCTAAAGAAGAATGATGACTCCATTGGAGAACAAGAGAAGATAATTATCAACACAACTACTTCAAATGGAACATTAGAACAGAAGAGTATCACAAGCAATCATCATCTAAAAACTGAGCATGATAATAAACCCCCCCCCCCCCCAATCCTAAATTATTAG 936 0.4038 MIVAFLVIPDFGRAAHVYNHLIQSCIYMNPKEVISRFRNWKNIFAKKQDFIMQVENYIAQNGTEAFEKLIASKNTEQSLLHAETRKAVPRTTEKNEILKLNAKFPTLQHNAALDSLKSKERTSSFMAKTENMPADTEHGTHAKISAAENVQKEWTCAVCQLTMSSEAKLNFHLQGRKHKAACEALNTMKTKAAPMKNTKTRASSQASSSKNAQNTFTCVVCQMTKLSKDNMKSHLKGKKHKAACEALNGKSQGVYEKGLLKKNDDSIGEQEKIIINTTTSNGTLEQKSITSNHHLKTEHDNKPPPPPILNY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0786 311 Pfam Zinc-finger of C2H2 type 154 178 - -
Mibi06g0786 311 Pfam Zinc-finger of C2H2 type 216 240 - -
Mibi06g0786 311 PANTHER OS06G0651300 PROTEIN-RELATED 94 205 - -
Mibi06g0786 311 SUPERFAMILY beta-beta-alpha zinc fingers 144 188 IPR036236 -
Mibi06g0786 311 SMART ZnF_U1_5 151 185 IPR003604 GO:0003676|GO:0008270
Mibi06g0786 311 SMART ZnF_U1_5 213 247 IPR003604 GO:0003676|GO:0008270
Mibi06g0786 311 SMART c2h2final6 154 178 IPR013087 -
Mibi06g0786 311 SMART c2h2final6 216 240 IPR013087 -
Mibi06g0786 311 SUPERFAMILY beta-beta-alpha zinc fingers 189 250 IPR036236 -
Mibi06g0786 311 MobiDBLite consensus disorder prediction 278 311 - -
Mibi06g0786 311 Gene3D Classic Zinc Finger 192 246 - -
Mibi06g0786 311 Gene3D Classic Zinc Finger 132 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0786 Mibi-ChrMibi06 26539896 26542541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0786 154 282 C2H2 Transcription Factor Family AT2G19380 24.138 1.06e-06 48.1