Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0783 ATGCATGGGACTACATCTAACTAAACTAGGAAAGCAGTTCCAAGAACTACAGAGAAGAATGAGATCCTGAAGCAAGTTTCAAACATGAAAGAAACTGTAAGCATTTCTGGGTTGAAGTATTTGATACATGAAGAAGTTTATCTTCCAACCTTACTTTCTTTGACAAATAAAGAAAGGTTTCTCTTTGAACAGAAACACATCAAAGATTTGGAGATGATTGAGAAAGAGGAAGTTTGTGAAGGCAAGCAAGATAGCCTCAAATCAAAGGAAAGCACTTCATCTTCCATGGCGAAAGCAGAAAATATGCTAGCAGACACAGCAGACTTAGATCATGGAACACATGCTAAGATTTCTGCAGCAAAGAATGTACAGAATGAGTGGACATGTGCCATATGCCAGTTGACAATGTCTTCTGAAGCCAAGTTGAATTGCCACTTGCAAGGAAGGAAACATAAAGTTGCTTGTGAAGCTTTGAACACGATGAAAACTAAAGCAGCACCGATAAACACAGGAACTAGAGCGTCTTCAATGATGAAAAACACAAGAATCAGAGTATGTCCTCAGGTTTCTGCATCTAAAAATGCACAAAAAATGTTTAATTGTGCTGTCTGTCAGTTGACAAAGCTACCTAAGCATAATATGAAGTCCCACCTGAAAGGGAAGAAACATAAGGCTGCTTGTGAAGCATTGAGTGGGAAAAGCCAAGGTGTTTCTAAGAAAGGCTTGCTGTAG 732 0.3893 MHGTTSNXTRKAVPRTTEKNEILKQVSNMKETVSISGLKYLIHEEVYLPTLLSLTNKERFLFEQKHIKDLEMIEKEEVCEGKQDSLKSKESTSSSMAKAENMLADTADLDHGTHAKISAAKNVQNEWTCAICQLTMSSEAKLNCHLQGRKHKVACEALNTMKTKAAPINTGTRASSMMKNTRIRVCPQVSASKNAQKMFNCAVCQLTKLPKHNMKSHLKGKKHKAACEALSGKSQGVSKKGLL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0783 243 SMART ZnF_U1_5 196 230 IPR003604 GO:0003676|GO:0008270
Mibi06g0783 243 SMART ZnF_U1_5 124 158 IPR003604 GO:0003676|GO:0008270
Mibi06g0783 243 SUPERFAMILY beta-beta-alpha zinc fingers 189 230 IPR036236 -
Mibi06g0783 243 Gene3D Classic Zinc Finger 111 156 - -
Mibi06g0783 243 SUPERFAMILY beta-beta-alpha zinc fingers 117 160 IPR036236 -
Mibi06g0783 243 PANTHER OS06G0651300 PROTEIN-RELATED 85 166 - -
Mibi06g0783 243 Pfam Zinc-finger of C2H2 type 127 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0783 Mibi-ChrMibi06 26500725 26502920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0783 97 235 C2H2 Transcription Factor Family AT2G19380 26.619 1.58e-07 49.7