Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0754 ATGGTAGGTGAGAAAGGAGTCGCCGCTTCAGAGGTAGAGGAAACGGTGGTTCTCTGTGACGGAGGAGACATGGAAAATGACGACGTCGACATGCAAAGCTACGATACCAATGAAGCAGAATTGGATGACATGAAGAAGCGTTTGAAGGAGATGGAAGATGAGGCGGCTGCTTTGCGTGAAATGCAGGCCAAGGTGGAGAAGGAGATGGGCGCCGTCCAAGATCCCGCTAATGCTGCTGCAAGTCAGGCCAATAGAGAGGAAATAGATGCTCGGTCAATCTTTGTAGGCAATGTAGATTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGAGTCACCATTCGTACTGACAAGTTTGGCCAACCCAAGGGTTATGCGTATGTGGAGTTCCTTGAGGTAGAGGCTGTTCAGGAGGCACTTCAGCTGAATGAATCTGAACTACATGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCCGGGATGAAGCAGCATCGCCCCCGCCGGTCCAACCCTTATATGGGGTTTCGTGGAAGAGCCCCATATGCACCTCCATTCGCCTACTCTCCTTATGGATATGGGAAGGTTCCAAGGTTCAGAATGCCAATGCGTTATAGCCCATACTATTGA 660 0.4955 MVGEKGVAASEVEETVVLCDGGDMENDDVDMQSYDTNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGAVQDPANAAASQANREEIDARSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALQLNESELHGRQLKVTAKRTNIPGMKQHRPRRSNPYMGFRGRAPYAPPFAYSPYGYGKVPRFRMPMRYSPYY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0754 219 SMART rrm1_1 92 163 IPR000504 GO:0003723
Mibi06g0754 219 Gene3D - 19 176 IPR012677 -
Mibi06g0754 219 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 161 IPR000504 GO:0003723
Mibi06g0754 219 Coils Coil 34 68 - -
Mibi06g0754 219 CDD RRM_II_PABPs 92 163 - -
Mibi06g0754 219 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 27 190 - -
Mibi06g0754 219 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 167 IPR000504 GO:0003723
Mibi06g0754 219 SUPERFAMILY RNA-binding domain, RBD 82 189 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0754 Mibi-ChrMibi06 25875568 25881103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0754 92 162 Eukaryotic Initiation Factors Gene Family AT2G36660 33.333 3.71e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0754 06 25875568 25881103 Mibi06g0754 06 25875568 25881103 CCT