Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0711 ATGGCCACAGTCGCCGCCGTTCCACCATCACAAACCCTAAAATCAGAATCCCTTCCTCGCATAGACACAACAACTCTCTCCCAATCAGAGCTTCAATCTCTCTCTCTCTGCTCTCTCTCCGCCTTCGACCTCACCTCCACCACCAACCTCGTCTTCCCCAATGTCGACCGCTCTCTCTTCAACGAGAGCGCCGGATCTCGCCGCCAGACCTATTCTCGACCCCGCAAAACCCTCCTTTCCCCTTCCGATTCGCCCTCCGGCCTCCGACGCCGTGTCGCCGGCCTCCTCCCGACGCCGAAGCCCCCTCCGGTCCCCAATAACGACCCGGAGAATCTCGAGAACCGGAGGATTATCGATAATCTGAAGCAATTGATTAGGGAAGATCCTAAATTGGATCAGGTTGAGCTGGTTTCGCCTGAAGTTAGGGATAATTTTGAATTTAGGGTTGGTGGGGGTGAGGATGTGGGGTTGGTGAGGAAGAGGAAGAGGGGGAGGAAGCCGAAGGTGAAGGGGGATTTGTTGAAGGAGTGTTGTAAGGAGGTGGAGGTTGTGAATAAGAGTGGTGTTGTGGTTGATGTTTGTGTTTTGGGGGATTTGGAGGATCCTTTTGCTGAGGAGTTGAGGAGGAGGACTGAGGGGTTGGTGGGTGAAGAGGAGCTGTTGGGGTTTTTGAGGGATTTGGAGGGACAATGGGGGAGTAGGAGGAAGAAGAGGAAGATCGTGGATGCCGGCGATTTCGGCGATGTGATTCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGGAAAGATGGGCGTGCTTGGATTTATTGCCGCAGATACATCAGTCCTAATGGTGAACAATTTGTATCTTGCAAAGAAGTTTCTTCATATCTTCAGTCCCTTCTTGGTCACAATGATGCCCGGTCACCAATCAATCGTAGGGTTGAAAATCTGCTGATGGACAATAGGGTGACAACTCAAAGTTTTGCAGGTGTTACACATGAGGAGCAGGATAAGAGGACGATCATTACAAATGACTCAGCTCCACCCAGTTCTTCTGAATGTAATGAACGATTGAAGGATGTGGCCTTATTGGGAATCGAGAATCTTGCAGACGTGCAAGTACATGACCTATTTGAATGTCACAAATGTAACATGACATTTGATGAGAAGGATTCATACTTGCAGCATCTTTTGTCTGTCCACCAAAGGACAACGAGGCGCTATCGACTTGGCTCTTCTGTTGGAGATGGAGTTATAATCAAAGATGGAAAATATGTGTGCCAGTTCTGCCATAAGGTGTTTCTGGAAAGGCGTCGCTACAATGGACATGTAGGGATCCATGTTAGGAACTATGTGAGGAAAGTTGAAGAATCACCAGGTCAGGTAACTGTTCAAAGGAGAGATAAGTCTCCAATGAAGGAGGATTTTTCTTCAAGGATCTCTAAGATGGACGCACTAATTGAAATTGCTCAGAACTCTATTATGGAGAATTCTGCAATTGAACCCTATGGTGGTCATTCTTCGTCTCCTGATAGACTGAATGTAATTTCTACAACAGATGTTGCTGTTGGTAACTTAGATCATGACAAAATTACTGAGTCTCCTCTCAGTGATGAGGAAATGGAAGATAACGTCAATTACAAAAATGTTGATCACAATCTGGAACACCAAGGTAGTAAACTTGCAGTCATGGATGAAGATGTAGAGAAAACTGATGGTGGCAATGAAGTTATAGATTCCAAGATCTCCTGTGAGGATTCCATTGGTTTGTCTACAATAGAAGAGCAAAATGAGAATTCAATAAAAGATGAAGTGGCAATGACTTTTGATGGTTTGGATAGGTCCAGTGTTGATTTGGAAGGATTTTCACAAAGCCCTTTACTTCCTTCATCTGTCAATGGTATAACCCCTGAAGTTGAAAATAATAGAAATTCTGGTGGCACTATTACTGTGGAGCTGCTTAACCACGATGAGGATAGTAGAATTGAGAATGAGTTCAAAGTTGACATAGATGGCACAAAAGATGTATCTGTTATGTCTAAAATCCAAGAGACAACATTGCCTAATTCTAAAGAGAATACATTGTCATCTGAGGTCCCAACCCTTTCTATGTCCATGGCACAATCTCTGGAATGCTTTTTCCACCTCACTGGACTCTCAGACAAGGGGGAAATCCAATATTTTAGTGATGACCACAACCAGGAGGACGAGGATGTGAATGGGTCCCAGGAATTGAGGTTTGATGAAACAGAAACTTCAAAGTGTGATTTTGCAACTGGTCAGCCTTCTCATTCTCTGTCTCAGGTGCCAAAAGCTTTGGCAAACAACAACACACAGATGGAAGAAGAAGAAGGGGCCTGTGCTTCCTTAGTTCAGGTTGAGTCTCAAGAAACAGGAAAACAGCATCAGATCACAACATCGTGTGTATGGTGTGGAATAGAGTTTGATTATGATGCTGTTGATTCTGAAATACAACCAGATTCCGTTGGATTCATGTGCCCAGCTTGTAAGGCCAAAATATCTGGTCAAATCGACGTGTTGGACTGTGGATCACCCTTGAATTCTGACCATATTTGA 2562 0.45 MATVAAVPPSQTLKSESLPRIDTTTLSQSELQSLSLCSLSAFDLTSTTNLVFPNVDRSLFNESAGSRRQTYSRPRKTLLSPSDSPSGLRRRVAGLLPTPKPPPVPNNDPENLENRRIIDNLKQLIREDPKLDQVELVSPEVRDNFEFRVGGGEDVGLVRKRKRGRKPKVKGDLLKECCKEVEVVNKSGVVVDVCVLGDLEDPFAEELRRRTEGLVGEEELLGFLRDLEGQWGSRRKKRKIVDAGDFGDVIPVGWKLLLGLKRKDGRAWIYCRRYISPNGEQFVSCKEVSSYLQSLLGHNDARSPINRRVENLLMDNRVTTQSFAGVTHEEQDKRTIITNDSAPPSSSECNERLKDVALLGIENLADVQVHDLFECHKCNMTFDEKDSYLQHLLSVHQRTTRRYRLGSSVGDGVIIKDGKYVCQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPGQVTVQRRDKSPMKEDFSSRISKMDALIEIAQNSIMENSAIEPYGGHSSSPDRLNVISTTDVAVGNLDHDKITESPLSDEEMEDNVNYKNVDHNLEHQGSKLAVMDEDVEKTDGGNEVIDSKISCEDSIGLSTIEEQNENSIKDEVAMTFDGLDRSSVDLEGFSQSPLLPSSVNGITPEVENNRNSGGTITVELLNHDEDSRIENEFKVDIDGTKDVSVMSKIQETTLPNSKENTLSSEVPTLSMSMAQSLECFFHLTGLSDKGEIQYFSDDHNQEDEDVNGSQELRFDETETSKCDFATGQPSHSLSQVPKALANNNTQMEEEEGACASLVQVESQETGKQHQITTSCVWCGIEFDYDAVDSEIQPDSVGFMCPACKAKISGQIDVLDCGSPLNSDHI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0711 853 MobiDBLite consensus disorder prediction 64 84 - -
Mibi06g0711 853 SMART c2h2final6 373 396 IPR013087 -
Mibi06g0711 853 SMART c2h2final6 420 442 IPR013087 -
Mibi06g0711 853 Gene3D Classic Zinc Finger 362 445 - -
Mibi06g0711 853 ProSiteProfiles Zinc finger C2H2 type domain profile. 420 447 IPR013087 -
Mibi06g0711 853 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 240 312 IPR001739 GO:0003677
Mibi06g0711 853 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 618 IPR037472 -
Mibi06g0711 853 ProSitePatterns Zinc finger C2H2 type domain signature. 422 442 IPR013087 -
Mibi06g0711 853 SUPERFAMILY DNA-binding domain 248 295 IPR016177 GO:0003677
Mibi06g0711 853 MobiDBLite consensus disorder prediction 64 112 - -
Mibi06g0711 853 ProSitePatterns Zinc finger C2H2 type domain signature. 375 396 IPR013087 -
Mibi06g0711 853 ProSiteProfiles Zinc finger C2H2 type domain profile. 373 401 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0711 Mibi-ChrMibi06 24936261 24940258 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g0711 None None None