Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0704 ATGGCCGAGCGTGATTCTTATGGGCTGGGTCCTCAATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGTTGGTTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTCCATATCACATCAGAACCTCCTAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGGTATTTCAGAAAAGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCCCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGCTGCTTGAACAGGATATGATGCACATTGTTTTCGTCCACTACTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGTAAAACCAGATATTGATGAGGTTTCATCAGATTCCCAAAGAGGAAGCTCTGCATCATCTGGGTTTTCGAGAAATTATAGTACTGTGCCTTCTAGAAGTACAGATTCCTTGAGCCCAACTAGCACTTTGACATCCTTATGTGAAGACGCAGACTCTGGCGATCGTGCACAGTCATTTGTTTCTGGAGCAGACTATATTCCACAAGTTCAGCGGGATAAACCTAGAGGCAGTGATGCTAGTACTTCTTTCACTGATGGCAAAGAAACAAATGGAATGACCCTACAGGACAATGGCTTTGAACAATGTACAAATAGATTATCTTCTGATCCATCCCTTGCACCATTCACTTCCAACCCATCCAATTCAATAGGAAACATTCTTGAACCAGATAATACTATTCCGGGTGACCTTTTGGCCATAAAAAATGTCCTCACTGGGACAGCTGGGAGTTCTCAGTCCCTCCAATCTAATTGGCAGATCCCCTTTGAAAGTAACCCAGGACAGTCGTTGAACGAGCTTACAACACAATCACTGGGTTTGGAATTTGGATCTGATTTTAGCAATGGTTTGCTGGGACTTGATACACACAATCATGTTGCTTCTGGCCCGGAAACTTTCAACTATCTGCGAAAAGAGGAGGCTGCGGTGGAAAACTTCCCAGATACTCAATCTCAAAATTTTCTGAAATACAATTTTGGGAAAGAAGTTCCTGCAGAAGAAAGTATTAATTATGCCTTGACTGTGAAGCGGTCCTTATTAGACGGGGAGGAAAGCCTTAAGAAAGTTGACAGCTTCTCTCGGTGGATTACTAAAGAACTTGAAGAGGTGGATGATCTTCATATGCAGTCATCACCTGGCATCTCTTGGAGTGCTGATGAATGTGGGAATGTGATAGATGATTCCTCATTGAGCCCCTCCCTTTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATCGGAAACAGAGGTTTTGATCATTGGAACGTTTTTGAGGAGTCAAACAGAGGTAGCGAATTGTAACTGGTCGTGCATGTTTGGTGAAGTTGAGGTTCCTGCTGAGGTTCTAGCCAGTGGAATTTTGTGCTGTCAGGCTCCACCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATCGGTTGGCTTGTAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTCGCTCAAAATGTTGATGTTTCAGACTTCTATAACCGTTCAACTGAGATGCAGCTTCAACAGAGTCTAGAGAAGTTACTTTCTTCAAAATCTGCGCTCTGTTCAAACTACAGCTTTGACAATGATATGATGAAAAGAAACTTAATGTTTAAGCTCATTACACTAAAGGAGGAAGAGGCAATATCAGATAGGGAAGAGCTGATGTCAGAGAAAAATGCGTCCCATCAAAAGGTGAAGGAGTTAACATTTTACAGGCAAGTTAAAGAGAAGCTGTATTCTTGGCTTCTTCGCAAAGGAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTAGCAGCTGCTCTTGGTTATGATTGGGCAATTATTCCAATAGTTACTGCTGGAGTAAATATCAATTTTCGGGATGTGAATGGATGGACAGCTCTGCACTGGGCTGCTTCCTATGGCAGGGAACGAACAGTTGCTGTACTTGTCTCTATGGGTGCAGCTGCTGGAGCATTGACAGATCCATCCCCGACCTTCCCGTCGGGTAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCTGAGTCATCATTAACCAGCCACCTATCAACCCTCACAATGAATGATCAGAAGGGAGATGTTGTGCAAAGAGCTTCAGAAGTAGAAGAAGTACAGACAGTTTCAAAGCGAACTGCAACACCAGGGTTTAGCAGTGATGTGCCAGATGCCCTCTGCCTTAAGGATTCGCTTACTGCTGTTCGCAATGCTACACAGGCGGCTGATCGCATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTGACCCAGTTTGAAGAAGATGAGTTCGGATTGTCAGATCAGCAAGCTCTTTCCCTTGTAGCTTCTAAGGCATGCAAGGCTGGACGTGGAGATGATTTAGTCCACACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGACTAAAAGAAAAGAATTTCTAGTAATTCGTCAAAGAATTGTTAAAATTCAGGCTCATGTAAGAGGTCACCAAGTAAGGAAGAAGCAGAAATCAGTCCTCTGGTCTGTAGGAATTTTGGAAAAGGTAATATTGCGATGGAGACGCAAGGGCAGTGGTCTCCGTGGCTTTCGACCAGATGCTAATAAAATCCCTAACCAAGAAAATGATACTGTGAAAAAGGATGATTATGATGTTCTTAAGGAAGGGAGGAAACAAAGTGAAGAAAGGTTCCAAAAGGCGCTTTCAAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTATCGGCGTCTGCTAAATGTTGTTGAGGATTTCAGGCAAACCAAGGCATGCGATATGGATGTGATCAATTCAGAAGAGACAGTCGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTAGATGATGACAATTTCATACCCATAGCATTTGATTGA 3129 0.4289 MAERDSYGLGPQLDIQQLQFEAQHRWLRPAEICEILRNYQMFHITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHKTSVGVKPDIDEVSSDSQRGSSASSGFSRNYSTVPSRSTDSLSPTSTLTSLCEDADSGDRAQSFVSGADYIPQVQRDKPRGSDASTSFTDGKETNGMTLQDNGFEQCTNRLSSDPSLAPFTSNPSNSIGNILEPDNTIPGDLLAIKNVLTGTAGSSQSLQSNWQIPFESNPGQSLNELTTQSLGLEFGSDFSNGLLGLDTHNHVASGPETFNYLRKEEAAVENFPDTQSQNFLKYNFGKEVPAEESINYALTVKRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGNVIDDSSLSPSLSQDQLFSINDFSPNWAYAESETEVLIIGTFLRSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYTESFAQNVDVSDFYNRSTEMQLQQSLEKLLSSKSALCSNYSFDNDMMKRNLMFKLITLKEEEAISDREELMSEKNASHQKVKELTFYRQVKEKLYSWLLRKGIEDGKGPNVLDEEGQGVLHLAAALGYDWAIIPIVTAGVNINFRDVNGWTALHWAASYGRERTVAVLVSMGAAAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMNDQKGDVVQRASEVEEVQTVSKRTATPGFSSDVPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEEDEFGLSDQQALSLVASKACKAGRGDDLVHTAAVQIQKKFRGWTKRKEFLVIRQRIVKIQAHVRGHQVRKKQKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIPNQENDTVKKDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0704 1042 FunFam Calmodulin-binding transcription activator 2 866 914 - -
Mibi06g0704 1042 SUPERFAMILY Ankyrin repeat 646 752 IPR036770 -
Mibi06g0704 1042 SMART ANK_2a 658 687 IPR002110 GO:0005515
Mibi06g0704 1042 SMART ANK_2a 730 759 IPR002110 GO:0005515
Mibi06g0704 1042 SMART ANK_2a 691 720 IPR002110 GO:0005515
Mibi06g0704 1042 Gene3D - 865 913 - -
Mibi06g0704 1042 ProSiteProfiles IQ motif profile. 890 914 IPR000048 GO:0005515
Mibi06g0704 1042 MobiDBLite consensus disorder prediction 217 236 - -
Mibi06g0704 1042 Gene3D - 617 812 IPR036770 -
Mibi06g0704 1042 SMART iq_5 889 911 IPR000048 GO:0005515
Mibi06g0704 1042 SMART iq_5 866 888 IPR000048 GO:0005515
Mibi06g0704 1042 Pfam Ankyrin repeats (3 copies) 663 752 IPR002110 GO:0005515
Mibi06g0704 1042 SUPERFAMILY E set domains 458 543 IPR014756 -
Mibi06g0704 1042 Gene3D Immunoglobulins 451 547 IPR013783 -
Mibi06g0704 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 916 IPR027417 -
Mibi06g0704 1042 Pfam IPT/TIG domain 458 536 IPR002909 -
Mibi06g0704 1042 ProSiteProfiles IQ motif profile. 868 896 IPR000048 GO:0005515
Mibi06g0704 1042 SMART CG_1_2 18 136 IPR005559 GO:0003677
Mibi06g0704 1042 ProSiteProfiles Ankyrin repeat region circular profile. 691 716 - -
Mibi06g0704 1042 ProSiteProfiles Ankyrin repeat profile. 691 723 IPR002110 GO:0005515
Mibi06g0704 1042 MobiDBLite consensus disorder prediction 153 191 - -
Mibi06g0704 1042 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Mibi06g0704 1042 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Mibi06g0704 1042 MobiDBLite consensus disorder prediction 146 236 - -
Mibi06g0704 1042 Pfam IQ calmodulin-binding motif 892 909 IPR000048 GO:0005515
Mibi06g0704 1042 Pfam IQ calmodulin-binding motif 869 887 IPR000048 GO:0005515
Mibi06g0704 1042 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1004 - -
Mibi06g0704 1042 FunFam Calmodulin-binding transcription activator 2 451 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0704 Mibi-ChrMibi06 24835792 24849022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0704 1 1023 CAMTA Transcription Factor Family AT5G64220 53.195 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mibi06g0704 CG-1 7.1e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g0704 06 24835792 24849022 Mibi06g0704 06 24835792 24849022 CCT