Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0701 ATGAGAGCTCTACAAACATGGTTGAACCATTTTATTACAGCAAATACCAGTACGTGAATCCAATTAAAAGCCAATATAGTGGCAGAACAACTCTCTGCAACTCCCATGGATTCCACGCATATATCTCTCTTCAGAGCTCTCAATCGCCATTTCTTTAGACCTCCTTCTACTCATTCCATTCCCTCCTCCGTTCTCCTCCGTCACAGGCTTAAATGCCTCTCTCATCATTACGATTTTCGCAACTCCAACTCTTTTCCTTCTCCTTCTTCTTCTTCCACCTCGCTCAGGAGCTTGTGTGCCGTGGTCTCCCGAATTCCCTGTCGTTTCCGCTGCGTTTCGAGCTCCGCTTCTCCTTTTGCTTCCTCTGGCTCCGGAAATGGCGGCCTTGGAGGCTTTAGCGGCGGCGCTGGCGGTGGAGATGGCGGTGCCGGTGGTGATTCTGGAGATTACAATGTCAAATTGGTTGGTGATGGTGGTAAAGAGCTTTCGGCACTCTCGCCTGATGTTATTATTCTCGACGTTGCGGGAATGGTTTGTGGTGGATGTGCGGCTAATGTGAAAAGAATTCTAGAAAGTCGACCTCAAGTGTCATATGCTACTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAGCTGTACCAAATTGGCAAAAGCATTTAGGAGAAGCACTTGCAGAGCATTTGAGTAGCTGTGGTTTCAAGTCTAGCCTTCGGGATTCAGCAACAGACAGTTTCCTCCAAGTTTTTGAAAGGAAGATGGAGGAAAAGCAGAGACAGTTGAAAGAAAGTGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCGTTGTTGGCCATCTTTCTCATTTCCTTGGAGCGAAGGCACCTTGGATCCATGCATTTCATTCCACTGGGTTTCACCTATCCCTGTCTTTGGTTACGTTGGTTGGTCCAGGGCGTCAACTTATCCTTGATGGCATAAGAAGCCTTCTTAAAAATGCTCCAAACATGAACACATTAGTTGGTCTTGGGGCTTTGTCATCATTTTCTGTCAGCTTATTTGCTGTCTTGCTGCCCAACTTGGGCTGGAAGGCTTTCTTTGAGGAGCCAATTATGCTCATTGCATTCGTCTTGTTAGGACGGAATCTGGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTCTTAGTATATTGCCATCAAAAGCTCGCCTTCTGGTTAAAAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGCCAGTCTTTCTGTTGGAGACCGAATTCTTGTGCTTCCCGGAGATCGTATTCCCGCAGATGGAATTGTCAGGACTGGTAGAAGCACTGTAGATGAGTCAAGTTTCACTGGAGAGCCTCTGCCAGCAACAAAACTACCTGGGAGTCAGGTTGCTGCTGGGAGTATAAATTTAAATGGCACTCTTACAATTGAGGTGCAGAGACCAGGCAGTGAGACTGCCATGGGAGACATCATTCGTCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCAGCATCTGCAGCCACATTTACATTCTGGAGTCTGTTTGGCACACGTATTCTACCTGCTGCTCTTTATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCTACACCTACAGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACAAGAGGATTACTTTTACGGGGTGGAAACATTTTGGAGAAGTTCTCAATGGTAGATGCTGTTGTATTTGACAAAACAGGGACTTTGACAATTGGTAGACCTGTCGTGACAAAGATTGTCAATACAAGTGGACAAAACAAAAACTTTAGGCAAACTGCAGACAATGATGGGTCAGATATTGAAGTTCTGAGATTAGCTGCTGGAGTAGAATCAAATACAGTACACCCAGTTGGTAAAGCAATTGTAGAAGCTGCTCAGGCAGTCAATTGTCATAATGCAAAGGCAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTAGCAATTATTAATGACAAAAAGGTTTCAGTTGGGACTTTGGAATGGCTCACCAGGCAGGGAGTTAACAAAAATACTCATCAAGAAGTTGAGGACTATAAAAACCAGTCTGTAGTTTATGTGGGAGTAAATGATACTGTAGCGGGCCTTATATATTTTGAAGACCAGATAAGGGAAGATGCAAGACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCAGGAGACAAAAGGAGTACGGCCGAGTATGTTGCATCTGTTGTTGGAATTCCTAGTGAGAAGGTGCTATCTGGAGTGAAGCCAGATGGCAAAAAGAAGTTTATAAATGAACTCCAGAAAGATCAGAAAGTTGTTGCCATGGTTGGCGATGGGATCAATGATGCAGCTGCCTTGGCTTCGTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCTAGTGAGGTGTCTTCTATTATACTGATGGGCAACAGGCTCTCTCAGCTTCTTGATGCACTGGATCTTAGCAAGCTTACCATGAAGACTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAATATTGTTGGAATTCCAATTGCAGCTGGATTGTTACTTCCAGTAAGTGGGACCATGTTAACTCCATCAATTGCAGGGGCTCTTATGGGCTTGAGTTCCATTGGGGTAATGACAAACTCATTGCTTCTAAGATACCGATTTTCTACAAGGCAAAAACAAATCCATGGGGTATTCCCAATGATCGAAACCCATGCAGATAGTGATCTTGCCCAAAAAGAGAAATTGAAATATGGACAGTAA 2928 0.4454 MRALQTWLNHFITANTSTXIQLKANIVAEQLSATPMDSTHISLFRALNRHFFRPPSTHSIPSSVLLRHRLKCLSHHYDFRNSNSFPSPSSSSTSLRSLCAVVSRIPCRFRCVSSSASPFASSGSGNGGLGGFSGGAGGGDGGAGGDSGDYNVKLVGDGGKELSALSPDVIILDVAGMVCGGCAANVKRILESRPQVSYATVNLTTETAIVWPVSEAKAVPNWQKHLGEALAEHLSSCGFKSSLRDSATDSFLQVFERKMEEKQRQLKESGRELAVSWALCAVCVVGHLSHFLGAKAPWIHAFHSTGFHLSLSLVTLVGPGRQLILDGIRSLLKNAPNMNTLVGLGALSSFSVSLFAVLLPNLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVKNDTKEFDSSVEVPSASLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGSQVAAGSINLNGTLTIEVQRPGSETAMGDIIRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGTRILPAALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVDAVVFDKTGTLTIGRPVVTKIVNTSGQNKNFRQTADNDGSDIEVLRLAAGVESNTVHPVGKAIVEAAQAVNCHNAKAADGTFLEEPGSGAVAIINDKKVSVGTLEWLTRQGVNKNTHQEVEDYKNQSVVYVGVNDTVAGLIYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPSEKVLSGVKPDGKKKFINELQKDQKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIILMGNRLSQLLDALDLSKLTMKTVKQNLGWAFLYNIVGIPIAAGLLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSTRQKQIHGVFPMIETHADSDLAQKEKLKYGQ 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0701 975 CDD P-type_ATPase_Cu-like 271 940 - -
Mibi06g0701 975 ProSiteProfiles Heavy-metal-associated domain profile. 169 243 IPR006121 GO:0046872
Mibi06g0701 975 SUPERFAMILY HAD-like 617 936 IPR036412 -
Mibi06g0701 975 FunFam Copper-transporting ATPase 1, putative 389 511 - -
Mibi06g0701 975 ProSitePatterns E1-E2 ATPases phosphorylation site. 620 626 IPR018303 -
Mibi06g0701 975 Gene3D - 169 246 - -
Mibi06g0701 975 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 338 939 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mibi06g0701 975 Gene3D - 609 880 IPR023214 -
Mibi06g0701 975 SUPERFAMILY HMA, heavy metal-associated domain 170 215 IPR036163 GO:0046872
Mibi06g0701 975 PANTHER ATP7, ISOFORM B 166 941 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 618 632 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 753 764 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 775 785 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 830 849 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 457 471 - -
Mibi06g0701 975 PRINTS P-type cation-transporting ATPase superfamily signature 853 865 - -
Mibi06g0701 975 SUPERFAMILY Calcium ATPase, transmembrane domain M 370 612 IPR023298 -
Mibi06g0701 975 Pfam Heavy-metal-associated domain 172 240 IPR006121 GO:0046872
Mibi06g0701 975 Pfam E1-E2 ATPase 403 596 - -
Mibi06g0701 975 FunFam Copper-transporting ATPase PAA1 chloroplastic 746 897 - -
Mibi06g0701 975 FunFam Copper-transporting ATPase PAA1 chloroplastic 629 761 - -
Mibi06g0701 975 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 420 639 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g0701 975 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 666 909 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g0701 975 FunFam Copper-transporting ATPase PAA1, chloroplastic 168 243 - -
Mibi06g0701 975 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 320 940 - -
Mibi06g0701 975 CDD HMA 172 242 IPR006121 GO:0046872
Mibi06g0701 975 SFLD Haloacid Dehalogenase 601 880 - -
Mibi06g0701 975 SUPERFAMILY Calcium ATPase, transduction domain A 420 507 IPR008250 -
Mibi06g0701 975 Pfam haloacid dehalogenase-like hydrolase 614 842 - -
Mibi06g0701 975 SFLD p-type atpase 601 880 IPR044492 -
Mibi06g0701 975 Gene3D - 629 761 IPR023299 GO:0000166
Mibi06g0701 975 Coils Coil 252 272 - -
Mibi06g0701 975 ProSitePatterns Heavy-metal-associated domain. 174 203 IPR017969 GO:0046872
Mibi06g0701 975 Gene3D - 388 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0701 Mibi-ChrMibi06 24774996 24792288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0701 329 940 Primary Pumps ATPases AT1G63440 38.057 1.13e-117 383