Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0699 ATGTCTCACTTTGGAAGGTCTGGTCCTCCTGACATCACCGACACCTATTCGCTTCTAGTGCTCAACATCACATTCCGTACAACCGCTGATGACCTGTTTCCCCTGTTCGATAAGTATGGCAAGGTCGTCGATATCTTTATTCCCAGAGATCGAAGGACTGGTGAATCAAGGGGTTTTGCATTTGTGCGCTATAAGTATGCTGATGAGGCACAAAAGGCTGTGGATAGGCTGGACGGAAGAGTGGTTGATGGCCGGGAGATAACTGTTCAGTTTGCAAAATATGGTCCTAATGCCGAGAAAATTCAAAAAGGAAGGATTATCGAAACATTCCCCAAGTCTAAGCAGAGGTCAAGGAGCCGCAGCCCCCGGAGAAGGGACAGGGATTATAGGAGGAGGAGTCGCAGCAGGAGTCATGATAGGTATGAAAGGGATAGGCATCGCAGAAGAGACAGAGATTATCGTCGCAGAAGTAGGAGCCGTAGTGCAAGTCCAGATAACTATAGGAGCCGAGGAAGGGATCGCTATGATGATGAGCGCCGAAGCCGAAGTCGATCTATGGATAGTCGCTCCCCTGCACGACGCAGTATTAGTCCTCGAAGGAGTCCTTCCCCTCAAAGGAGTGATTCCCCTCAAAGAAGTATTTCCCCAAGGAGGAGCCCAAGGGGTGAAAGCCCTGAGAGTCGTAGTCGTGATGGACGATCTCCTACACCTCGCAGTGTTTCACCTCGTGGTCAACCCAAGGATTCAAGAAGCCCATCACCTCAAAATTCTAATGGAGATGATTGA 786 0.4962 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQKGRIIETFPKSKQRSRSRSPRRRDRDYRRRSRSRSHDRYERDRHRRRDRDYRRRSRSRSASPDNYRSRGRDRYDDERRSRSRSMDSRSPARRSISPRRSPSPQRSDSPQRSISPRRSPRGESPESRSRDGRSPTPRSVSPRGQPKDSRSPSPQNSNGDD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0699 261 MobiDBLite consensus disorder prediction 156 189 - -
Mibi06g0699 261 MobiDBLite consensus disorder prediction 132 148 - -
Mibi06g0699 261 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Mibi06g0699 261 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 244 - -
Mibi06g0699 261 MobiDBLite consensus disorder prediction 103 261 - -
Mibi06g0699 261 MobiDBLite consensus disorder prediction 234 261 - -
Mibi06g0699 261 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Mibi06g0699 261 SMART rrm2_1 17 90 IPR003954 GO:0003676
Mibi06g0699 261 Gene3D - 4 105 IPR012677 -
Mibi06g0699 261 MobiDBLite consensus disorder prediction 190 218 - -
Mibi06g0699 261 SMART rrm1_1 17 90 IPR000504 GO:0003723
Mibi06g0699 261 SUPERFAMILY RNA-binding domain, RBD 9 102 IPR035979 GO:0003676
Mibi06g0699 261 MobiDBLite consensus disorder prediction 219 233 - -
Mibi06g0699 261 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
Mibi06g0699 261 MobiDBLite consensus disorder prediction 116 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0699 Mibi-ChrMibi06 24756948 24759692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0699 14 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.443 8.01e-10 56.6