Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0695 ATGGCAGCCATTACTATTCATTTTCAAAAAGACAGCCAATTGCCTATGTTAAGTATTGTCAAATTTCGTGGCATCCTTGTTGCTGTACAGGCCAATTTTCCACCAACAATAATATCATATGCTGCATGTAGATTTTGTCATTTTGTGACAGAAGGGCGCCAAAATGCTTTGGGCCAAAATTTAAAATTGTCGCCGACCATCTTGCAAAGCAGAGTTGGAATTTTTTGGGATTTAGACAACAAACCACCCAAGTCTCTGCCACCTTATGAAGCTGCCACTAAGCTGAAAGTAGCTGCATCTCACTTTGGTGTTGTCAAGCATATGGTGGCTTATGCAAATCGTCATACTTTTAGCCATGTCCCTCAAAATGTTAGGGAGCAAAGAAAAGAAAGGAAAATGTTAAATCATTTAGAGAACAAAGGTGCGATCAAGCCAGCTGAACCTTATCTTTGTCGGGTCTGTGGGAGAAAATTTTATACAAATGAGAAGCTTGTTAACCACTTTAAGCAAATACATGAGCGGGAACACATAAAAAGATTGAACACGATAGAGTCAGCAAAGGGGAACAGGAGGGTGAAGTTGGTTGCTAAGTTTTCAATGAAAATGGAGAAGTATAAGAACGCTGCAAAGAGCATTTTGACTCCGAAAGTGGGGTATGGATTGGCAGATGAGATAAAACATGCAGGGTTTTGGGTCCGGACTGTGTTGGATAAGCCACAAGCTGCAGATATTGCATTGAAATGTCACTTGGTAGATATGATGGATAATAAGCAGGTTGACTGTGTGGTTCTTGTTTCAGATGATTCTGATTTTGTTGATGTGTTAAAGGAGGCAAAATTCCGATGTCTCAAGACAGTTCTTGTTGGTGATACTAATGATGGGCTCTTGAAGAGGACTGCTGATGCTGCCTTTTCTTGGGAGGAAATTCTGATGGGGAAGGCGAAGAAGGAAGCAGTATCAGCTGTTGAAAAGTGGAAGGATCGTGATATTTTGAAAAGATTAGAGTGGACATACAATCCAGAGGTGGAGAAAAAGAAATTTAGTTCAAATGATATGGTCGCTGAGGCTACTTTGGATGAAGACATTATTGATACATGTGGTGAAGATGACGGTGCCTATAGCAATAAAGACGACTCAAATGCTTGGTGGGAATTGGATACTGATGATGATTTAATAAATAAACAATCAGGAAAATAA 1197 0.3985 MAAITIHFQKDSQLPMLSIVKFRGILVAVQANFPPTIISYAACRFCHFVTEGRQNALGQNLKLSPTILQSRVGIFWDLDNKPPKSLPPYEAATKLKVAASHFGVVKHMVAYANRHTFSHVPQNVREQRKERKMLNHLENKGAIKPAEPYLCRVCGRKFYTNEKLVNHFKQIHEREHIKRLNTIESAKGNRRVKLVAKFSMKMEKYKNAAKSILTPKVGYGLADEIKHAGFWVRTVLDKPQAADIALKCHLVDMMDNKQVDCVVLVSDDSDFVDVLKEAKFRCLKTVLVGDTNDGLLKRTADAAFSWEEILMGKAKKEAVSAVEKWKDRDILKRLEWTYNPEVEKKKFSSNDMVAEATLDEDIIDTCGEDDGAYSNKDDSNAWWELDTDDDLINKQSGK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0695 398 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 69 393 - -
Mibi06g0695 398 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 177 IPR013087 -
Mibi06g0695 398 Pfam NYN domain 223 301 IPR021139 GO:0004540
Mibi06g0695 398 SUPERFAMILY beta-beta-alpha zinc fingers 146 175 IPR036236 -
Mibi06g0695 398 CDD PIN_LabA-like 159 290 - -
Mibi06g0695 398 Gene3D - 68 310 - -
Mibi06g0695 398 ProSitePatterns Zinc finger C2H2 type domain signature. 151 172 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0695 Mibi-ChrMibi06 24700225 24701421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0695 71 391 C2H2 Transcription Factor Family AT4G12240 62.305 1.09e-146 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g0695 NYN 3e-07 CL0280