Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0682 ATGAATCTTTCATTACCAGCATCATCATCAGTTCTTCCACGGTCAAACAAATCATCATCATCATTAAGGCCTAGGAGGATTTCTGTGATTTCATGTTCTTCTACTTCAACCACCACCATGAATAATAATAACAATAAGAGCTGCAACTTCTACAAGCTTCTTTCTTTAAGCTCAGAGGCTGCAACCAAGACTGAAATCAAGCAGGCTTACAGGTCAATGGCGCTACGGTATCATCCTGACGTGTGCCGAGATGACGTGGCGAAGGAGGAGTGGACGAGGATGTTTGTGCAGCTTAATGCTGCTTATGAGACTCTGTCCAATCCCCTGCTTCGTCAAGAGTATGACTACAATGTTCTTGGACTCAGGCGGCTGAGGACGGCGGCTCCGGCCACCGTGGCGGCCGCCGGTGTTGGTATCGGTGATGATGAGATAAGGTTGAGAAAGAGTGGGTGTGAGGATCAGAAGAGAAGGTCTAGCAGAAGTTCCATGAGAACTCAGAGAATGAGACATCGCAATTGA 519 0.4721 MNLSLPASSSVLPRSNKSSSSLRPRRISVISCSSTSTTTMNNNNNKSCNFYKLLSLSSEAATKTEIKQAYRSMALRYHPDVCRDDVAKEEWTRMFVQLNAAYETLSNPLLRQEYDYNVLGLRRLRTAAPATVAAAGVGIGDDEIRLRKSGCEDQKRRSSRSSMRTQRMRHRN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0682 172 Pfam DnaJ domain 49 115 IPR001623 -
Mibi06g0682 172 PRINTS DnaJ domain signature 52 70 IPR001623 -
Mibi06g0682 172 PRINTS DnaJ domain signature 90 110 IPR001623 -
Mibi06g0682 172 PRINTS DnaJ domain signature 70 85 IPR001623 -
Mibi06g0682 172 MobiDBLite consensus disorder prediction 1 23 - -
Mibi06g0682 172 ProSiteProfiles dnaJ domain profile. 49 118 IPR001623 -
Mibi06g0682 172 SMART dnaj_3 48 110 IPR001623 -
Mibi06g0682 172 CDD DnaJ 49 107 IPR001623 -
Mibi06g0682 172 SUPERFAMILY Chaperone J-domain 43 117 IPR036869 -
Mibi06g0682 172 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Mibi06g0682 172 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 8 145 - -
Mibi06g0682 172 Gene3D DnaJ domain 35 129 IPR036869 -
Mibi06g0682 172 MobiDBLite consensus disorder prediction 149 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0682 Mibi-ChrMibi06 24482605 24483123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0682 46 115 C2H2 Transcription Factor Family AT1G74250 38.889 5.19e-06 43.9