Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0667 ATGAAAGTGGGGTCATCCAAATTAAGTGAAAGCTCCCAATTCCAGAGTGAAAATGAAGGAAGTAGACATGTGGAAGCTACCAAGAAGAGAACGAGACATATAGAAAGAGAGGTTTTGTCTTTCATGGGTGCCATACTCCTTTGTGCAATCTTAGTATTTGATTTGGTGCTTAATGTTTCTGGAAATGCTGAAGGTGATGCTTTGAATGCATTTAAGACCAACGTAACTGATCCAAACAATGACTTTGAAGCTCACTTTTGTCAGCTTAAAAAGTTTCCCCTGCATGAACTTCAAGCTGCAACAGACAACTTTAGTGACCAAAACTTTCTGGGTAGAGGTGGGTTTGGTAAGGTTTACAAAGGACTGCTGGCTGATGGATCTTTTGTTGCTGTGAAAAGACTTCAAGCAGATGGCACTCAAGGCGGAGAACTTCAATTTCAAACAGAAGTGATAATGCTCAGCTCGGCTGTCCATCGTAATTTGCTCCGGTTGCGTGGTTTTTGCATGACATCAACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACAAGGTATCATTCATGTGAAAGAGCTTTGGAAAGACAAGAGTGTGGAAACACTAATAGATGCTGATTTGGGAGGTGAATATAATGAAGAGGAGGTACAACAAGTAATCCAAGTGGCCTTGCTCTGCACACAAGGCTCGGCTTCAGAGAGATCAAAGATGTCTGAGGTGGTGAAGATGCTTGAAGGTGATGGTTTAGCACAAAAATGGGATCAATGGCAGAAAAATGGGATTAACATGCCAAATAATCACACACTTCTCCCTAATGTAAATTGGTCGATCTTGGATTCTGCTTCACATATTCCCCCAGATGAACTATCGGTCTGA 894 0.4172 MKVGSSKLSESSQFQSENEGSRHVEATKKRTRHIEREVLSFMGAILLCAILVFDLVLNVSGNAEGDALNAFKTNVTDPNNDFEAHFCQLKKFPLHELQAATDNFSDQNFLGRGGFGKVYKGLLADGSFVAVKRLQADGTQGGELQFQTEVIMLSSAVHRNLLRLRGFCMTSTERLLVYPFMANGSVASCLQGIIHVKELWKDKSVETLIDADLGGEYNEEEVQQVIQVALLCTQGSASERSKMSEVVKMLEGDGLAQKWDQWQKNGINMPNNHTLLPNVNWSILDSASHIPPDELSV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0667 297 FunFam Somatic embryogenesis receptor kinase 1 73 180 - -
Mibi06g0667 297 Gene3D Phosphorylase Kinase; domain 1 74 175 - -
Mibi06g0667 297 MobiDBLite consensus disorder prediction 1 20 - -
Mibi06g0667 297 ProSitePatterns Protein kinases ATP-binding region signature. 110 132 IPR017441 GO:0005524
Mibi06g0667 297 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 195 253 - -
Mibi06g0667 297 MobiDBLite consensus disorder prediction 1 29 - -
Mibi06g0667 297 SMART tyrkin_6 104 250 IPR020635 GO:0004713|GO:0006468
Mibi06g0667 297 Pfam Protein tyrosine and serine/threonine kinase 108 191 IPR001245 GO:0004672|GO:0006468
Mibi06g0667 297 SUPERFAMILY Protein kinase-like (PK-like) 83 194 IPR011009 -
Mibi06g0667 297 ProSiteProfiles Protein kinase domain profile. 104 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0667 297 Gene3D Transferase(Phosphotransferase) domain 1 176 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0667 Mibi-ChrMibi06 23146157 23154921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0667 41 79 Receptor kinase-like Gene Family AT4G33430 58.974 1.42e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi06g0667 Pkinase 4.9e-12 CL0016