LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g0662	ATGGCAGCTGAGGAGGACCCTGGAGCTCACCTTGGTCAGCTTAAAAAGTTTCCCCTGCATGAGCTGCAAGTTGCAACGGACAGCTTTAGTAACAAAAACATTCTGGGAAGAGGAGCATTTGGTAAGGTCTACAAAGGACGGTTAACTGATGGATCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCATTGAGAGTGGAGAGCTGCAATTTCAAATGGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCAACCGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGCAGTGTAGCATCATGTTTACGAGACCGCCCGGAATCAAGACCCCCACTTGAATGGGGTGTACGGAAGCGAATCGCACTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGATCCAAAGATCATTCACCGTGATGTTAAGGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAACTCATGGACTACAAAGATACTCATGTTACCACTGTTGTGTGTGGTACAATTGGGCACATTGCACCAGAATACCTCTCCACGGGAAAATCTTCAGAGAAGACTGATGTGTTTGGTTATGGTGTCATGCTTCTTGAACTAATTACTGGACGGAGGGCTTTTGATCTTGCACGACTTGCCAATGATGATGATATCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGAAAACACTGGTAGATGCTGATTTGCGGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATCCAAGTAGCCTTGCTCTGCACACAAAGCTCGGCTACGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAGAAATGGGATCAATGGCAGCAAGACGAGATGTATCGGCGAGATAATCAAACCCTTCTCCCTAATCCCGATTGGTCGATTGTGGACTCAACTTCACATATTCTACCAGATGAATTGTCAGGTCCCAGATGA	1059	0.4551	MAAEEDPGAHLGQLKKFPLHELQVATDSFSNKNILGRGAFGKVYKGRLTDGSLVAVKRLKEERIESGELQFQMEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPESRPPLEWGVRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMDYKDTHVTTVVCGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGRRAFDLARLANDDDIMLLDWVKGLLKDKRLKTLVDADLRGEYNEEEVEQLIQVALLCTQSSATERPKMSEVVRMLEGDGLAEKWDQWQQDEMYRRDNQTLLPNPDWSIVDSTSHILPDELSGPR	352

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g0662	352	Gene3D	Transferase(Phosphotransferase) domain 1	106	323	-	-
	Mibi06g0662	352	SMART	serkin_6	29	303	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi06g0662	352	ProSitePatterns	Protein kinases ATP-binding region signature.	35	57	IPR017441	GO:0005524
	Mibi06g0662	352	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Mibi06g0662	352	Gene3D	Phosphorylase Kinase; domain 1	1	105	-	-
	Mibi06g0662	352	ProSiteProfiles	Protein kinase domain profile.	29	308	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi06g0662	352	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	11	313	-	-
	Mibi06g0662	352	FunFam	Somatic embryogenesis receptor-like kinase 1	106	323	-	-
	Mibi06g0662	352	FunFam	Somatic embryogenesis receptor kinase 1	1	105	-	-
	Mibi06g0662	352	PIRSF	ILK	4	321	-	-
	Mibi06g0662	352	Pfam	Protein kinase domain	30	300	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi06g0662	352	SUPERFAMILY	Protein kinase-like (PK-like)	11	304	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g0662	Mibi-ChrMibi06	22925279	22927080	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g0662	1	352	Receptor kinase-like Gene Family	AT4G33430	81.127	0.0	592

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Mibi06g0662		Pkinase	2.8e-46	CL0016