Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0656 ATGAGACATATAGATAGAGGGGTTTCGTCTTTCATGGGTGCTTTACTCCTTTGTGCAATCTTCGTGTTTAATTTGGTGCTGAATGCTTCTGGTAATGCCGAAGGTGATGCCCTGAATGCATTTAAGACCAACGTAGCTGATCCAAACAATGTTCTTCAAAGCTGGGATGCTACTCTTGTCAATCCTTGCACTTGGTTTCATGTTACATGCAATAGTGATAATAGCGTGACCCGTGTTGATCTTGGAAATGCCAACCTTACAGGTCAACTAGTTCCACAGCTTGGCCAACTCCCCAATTTGCAGTACTTGGAGCTTTATAGTAATAGTATAACTGGAAAAATCCCAGCTGAAATTGGAAATTTGACAAATTTGGTGAGCTTGGATCTGTACACCAATAAGATAAGTGGCGGCATCCCAGAAACATTGGGCAAGCTTCAAAAACTGCGTTTCCTGCGTCTCAACAATAACACCTTGACTGGAGCCATTCCCATGACCTTAACTACTGTTATATCATTGCAAGTCCTTGATCTTTCAACTAACAAGCTAGAAGGAGACATCCCTATCACTGGTTCATTTCAATCATTTACACAACTCAGTTTTAATGGAAATCCTCATTTGAAACCACTGAACATTACACCTGGACCAATTTCACCAACACCGCCACCATCTCGTTCAGGCAATAGTGCTACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCAGCACCAGCAATTGCGCTTGCTTATTGCCGGAAGAGGAGACCACAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCCCTGCGTGAGCTGCAAGTTGCAACAGACAACTTTAGTAACAAAAACATTCTGGGAAGAGGGGGATTTGGTAAGGTCTACAAAGGACGTTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGAGAGCTGCAATTTCAAACGGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCAACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGCAGTGTGGCATCATGTTTACGAGACCGCCCGGAGTCAAGACCCCCACTTGAATGGAGTGTACGGAAGCGAATCGCACTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGATCCAAAGATAATTCACCGTGATGTTAAGGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTGGTTGGGGACTTTGGCTTGGCAAAACTCATGGACTACAAAGATACTCATGTTACCACTGCTGTGCGTGGTACGATTGGGCACATTGCACCAGAATACCTCTCCACTGGAAAATCTTCAGAAAAGACTGATGTGTTTGGTTATGGTGTCATGCTTCTTGAACTAATTACTGGACAGAGGGCCTTCGATCTTGCACGACTTGCCAATGATGACGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACGCTAGTGGATGCTGATTTGGGGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATTCAAGTAGCCTTGCTCTGCACGCAAAGCTCGGCTATGGAAAGACCAAAGATGTCTGAGGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAGAAATGGGATCAATGGCAGAAAGACGAGATGTATCGACGAGATAATCAAACCCTTCTTCTCCCTAACCCCCATTGGCCGATTGTGGACTCAGCTTCACACATCCCACCAGATGAATTGTCAGGTCCCAGATGA 1860 0.4478 MRHIDRGVSSFMGALLLCAIFVFNLVLNASGNAEGDALNAFKTNVADPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNANLTGQLVPQLGQLPNLQYLELYSNSITGKIPAEIGNLTNLVSLDLYTNKISGGIPETLGKLQKLRFLRLNNNTLTGAIPMTLTTVISLQVLDLSTNKLEGDIPITGSFQSFTQLSFNGNPHLKPLNITPGPISPTPPPSRSGNSATGAIAGGVAAAAALMFAAPAIALAYCRKRRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPESRPPLEWSVRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLGGEYNEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQKDEMYRRDNQTLLLPNPHWPIVDSASHIPPDELSGPR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0656 619 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Mibi06g0656 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Mibi06g0656 619 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0656 619 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0656 619 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Mibi06g0656 619 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mibi06g0656 619 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515
Mibi06g0656 619 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Mibi06g0656 619 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Mibi06g0656 619 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Mibi06g0656 619 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Mibi06g0656 619 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Mibi06g0656 619 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0656 619 SUPERFAMILY L domain-like 34 224 - -
Mibi06g0656 619 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 579 - -
Mibi06g0656 619 FunFam Somatic embryogenesis receptor kinase 1 30 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0656 Mibi-ChrMibi06 22617760 22626228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0656 20 619 Receptor kinase-like Gene Family AT4G33430 73.620 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi06g0656 Pkinase 3.2e-44 CL0016