Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0603 ATGATGGCCATACATTCAAGGCTCAGGCTTATTTGTTACTCACAAGAGATTGTAGATGGACAGTCAATTTTTGTTTCTTCAAATTGTAGTCCTGTCAAGGCTTGGAAATTTGAACCTGCGGGTCATGCCTTCCATTCTGCTGCACTTAAACTACTTGGGGTTGAGGAAGAAAAGTTAGAAGCTGAAGATAAAAAGGTGGTTGATGATAATGAACAGAATTATTTTCCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCGGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTGGGTTTGGCCCATCTAAGATACCTTGCTACAGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTATCATCCAGACAAGCAGGCAGCTCTAGTTCTTGCTGAAGAGACTGAAGCTGCAAAGCAGGCAAAGAAGGATGAGATAGAAAGCCATTTCAAGGCAATCCAGGAAGCTTATGAAGTTTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCTACAGATGAGTTTGATGATGAGATCCCTACGGACTGTGCCCCACAAGACTTCTTCAAAGTGTTTGGTCCTGCATTTATGAGGAATGGGAGGTGGTCAATTAATCAACCTATTCCATCTTTAGGTGACAACAATACTCCACTAAAAGAAGTTGATAATTTCTACAATTTCTGGTACGTCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGGGACCACAAGAGGTGGATGGAAAGGCAGAACGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAGTCTGCACGAATACGTTCCCTTGTTGATAATGCTTATAAGAGAGACCCTAGAATACTGAAGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAGAAAAAAGGAGGCTAAGTTTCTGGCAAAAAGGTTGCAGGAAGAAGAAGCTGCCAGGATTGCAGAAGAGGAGAAGCGGCGAAAGGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTCACAACAGAAAAAGTTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCTGGACCTATTGTATCACAAAATTTAATTGGTATATCTGAGGATGATGTAGAAAGTCTTTGCATGTCACTTGATACTGAGCAGCTGAGGTGTTTGTGTGAGAAAATGGATGTCCTACAGATTTCAGAACAAGCAAAAGTTCTCAGAGATGCACGTGATTGCAAAAATGATGGAGAAAATAAGAAAGAAGAAGAAACAACTAATAGACAGAATGGTTCTGTTAAGGCTAATGGTAGTACCTCTGCCTCAGTAGGAAACCTGGAGAAGAAGGAAAAACCTTGGAGTAGGGAAGAGATTGATCTATTGAGAAAGGGAATGGTAAAATATCCCAAAGGAACTTCTCGAAGGTGGGAGGTTATTTCAGAGTACCTTGGTACTGGACGGTCCGTGGAAGAAATTATGAAGGCGACAAAAACAGTTCTCCTCCAGAAGCCTGATTCCTCCAAGTCTTTCGATGCATTTCTTGAGAAAAGGAAACCTGCACTGTCAATTGCATCTCCACTCTCAACTAGATCAGAATTAGAAGGGGAATCAACTCCGGCAATCTCCCAAACTAATGCTTCCTCGACATCAAATAACAGTGCCGAAGACTCCAGCAGCAAAATAGCTGACAACCAAGTCTCTCCTAGTGCTGTCACTGAAAATGGAGTATCTTCTAGTTCAGACCAAGATGTCTGGTCGGCTGTACAGGAGAGAGCATTGGTTCAGGCTTTGAAAGCATTCCCAAAGGAAACTCCCCAGAGATGGGAAAGGGTTGCAGCAGCTGTCCCCGGAAAGACTGTGAACCAGTGCAAGAAACAATTTACAGTGATGAAGGAGAGCTTCAGGAGCAAGAAAAATGCAGCTTGA 1959 0.4232 MMAIHSRLRLICYSQEIVDGQSIFVSSNCSPVKAWKFEPAGHAFHSAALKLLGVEEEKLEAEDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYALLGLAHLRYLATEDQIRKSYRETALRYHPDKQAALVLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSINQPIPSLGDNNTPLKEVDNFYNFWYVFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEESARIRSLVDNAYKRDPRILKRKEEEKAEKQRKKEAKFLAKRLQEEEAARIAEEEKRRKEEEEKRAAEAASQQKKLKEKEKKLLRKERARLRTLSGPIVSQNLIGISEDDVESLCMSLDTEQLRCLCEKMDVLQISEQAKVLRDARDCKNDGENKKEEETTNRQNGSVKANGSTSASVGNLEKKEKPWSREEIDLLRKGMVKYPKGTSRRWEVISEYLGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPALSIASPLSTRSELEGESTPAISQTNASSTSNNSAEDSSSKIADNQVSPSAVTENGVSSSSDQDVWSAVQERALVQALKAFPKETPQRWERVAAAVPGKTVNQCKKQFTVMKESFRSKKNAA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0603 652 SMART dnaj_3 95 170 IPR001623 -
Mibi06g0603 652 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 10 651 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Mibi06g0603 652 CDD SANT 596 642 IPR001005 -
Mibi06g0603 652 SUPERFAMILY Homeodomain-like 594 648 IPR009057 -
Mibi06g0603 652 CDD DnaJ 96 167 IPR001623 -
Mibi06g0603 652 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Mibi06g0603 652 SMART sant 460 513 IPR001005 -
Mibi06g0603 652 SMART sant 592 644 IPR001005 -
Mibi06g0603 652 ProSiteProfiles Myb-like domain profile. 456 511 IPR001005 -
Mibi06g0603 652 Gene3D DnaJ domain 79 188 IPR036869 -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 330 357 - -
Mibi06g0603 652 ProSiteProfiles dnaJ domain profile. 96 178 IPR001623 -
Mibi06g0603 652 Gene3D - 457 514 - -
Mibi06g0603 652 Pfam DnaJ domain 96 175 IPR001623 -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 440 456 - -
Mibi06g0603 652 ProSiteProfiles Myb-like domain profile. 588 642 IPR001005 -
Mibi06g0603 652 Coils Coil 302 370 - -
Mibi06g0603 652 SUPERFAMILY Homeodomain-like 462 506 IPR009057 -
Mibi06g0603 652 PRINTS DnaJ domain signature 49 67 IPR001623 -
Mibi06g0603 652 PRINTS DnaJ domain signature 119 134 IPR001623 -
Mibi06g0603 652 PRINTS DnaJ domain signature 150 170 IPR001623 -
Mibi06g0603 652 SUPERFAMILY Chaperone J-domain 94 202 IPR036869 -
Mibi06g0603 652 CDD SANT 463 505 IPR001005 -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 62 93 - -
Mibi06g0603 652 Gene3D - 586 652 - -
Mibi06g0603 652 FunFam Myb family transcription factor 590 650 - -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 426 461 - -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 253 276 - -
Mibi06g0603 652 ProSiteProfiles SANT domain profile. 591 646 IPR017884 -
Mibi06g0603 652 MobiDBLite consensus disorder prediction 536 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0603 Mibi-ChrMibi06 21227050 21229008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0603 97 296 C2H2 Transcription Factor Family AT1G74250 28.870 1.09e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g0603 DnaJ 8.1e-18 CL0392