Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0601 ATGAGTTCTCCAGTTGAAGTGGGCGGTCGAGGTGACAAGCCCCCAAATGAGGGGCTTAAATTTGGCTGCAAAGAGCCAACTTTCTTGTATGGTGATCTGGATCTGTATGTGTTAAAAGCAAAAAATCTTCCAAATTTGGATCTTTCTTCTGAAACAGTGAGAAAATGTTGCACTATGGGTAATACTTGTACCCCTCCCTTCATGAAACCACACAAGATAGGGAGTGGGAAATATCATGTAGACACCAGTGATCCCTATGTCTCTGTCGTTGTGGCAGGGGCTACGGTAGCTCAAACTCGAGTAGTTCGTAACAATGAGCATCCTTCATGGGATGAGCATTTTGTTGTTCCAGTGGCGCATCCTGCTGAGAAAATAGAGTTTGTTGTGAAAGATGATGATGCTCTTGGGGCTGAGATCATAGGAGTTGTAGAGATACCTATTCAAAAGATTATTTCTGGAAGAACTATTAATGATTGGTTTCCAATCAATGGTTGGCTCTCAAATTCCTCAAAAGGTACACCTGAGTTACATATCTCTATTCAGTATAAGCCATTTGGATCACACCTTTCAGACAAATTTGGCATTGGAGCTGTTGAAGATCATCCAGGTGTTCCTAACACATATTTCCCTCCTCGGAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTGCCAGATGGTAAACTACCTGAAATATCACTTGAGGAGGGAAAAGTCTTTCAGCAGGGTAGATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCGTCAGCTGATATACATTGTAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCTTACCTGCTGGAGGAGAGCTTTCACTGGGAGAGTTGTTGAAATATAAGTCACAAGAAGGTGTCCGTGTGGTTATGCTGATCTGGGATGACAAAACTTCGCATCACAATTTGTTTATGAAAACAGATGGTGTCATGCAAACCCATGATGAAAAAACTAAGAAATTTTTTAAACACTCTACTGTTCATTGTGTGCTTGCTCCACGTTATGCTAGTAGCAAGCTTAGTATTTTCAAGCAACAGGTTGTTGGAACCCTTTTTACACATCATCAGAAGTGTGTAATACTTGACACCTCTGCTTGTGAGGATAAACGGAAAATAACCGCTTTTATAGGTGGTCTAGATCTATGTGATGGAAGATATGATACTCCTGATCATCGGCTTTTTGTCGATTTAGACACCATCTTTCAAAATGATATTCATAATCCGGTCTTCCCTTCAAATATTGGAGTACCAAGGGAACCATGGCATGACCTACATTGTAAAGTTGAGGGTCCAGCTGCATACGATATATTGACCAATTTTGAACAAAGATGGAGGAAAGTCAAAAAGTTACGTGATTTCAAGATAAAAAGGATGTCAAATTGGCATGATGATGCTTTGCTAAGGTTAGACCGTATTTCATGGATTGTAGGTCCATCATCTGATGATACTGGTGACCAAGCTGTTCAGGTGACTGATGAAGATGATCCAGAAAGCTGGAATGTGCAGGTGTTTCGGTCCATTGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATATTGACCAAGCTAAGGCTCAGCATCTTCTCTGCGGAAAGAACTTAAAAGTTGACAAAAGTATCCATACTGCTTATGTAAAAGTAATAAGATCAGCCCAACACTTCATATATATTGAGAATCAATATTTTCTTGGATCCTCATATCACTGGCCCTCATACCAACATGCAGGTGCTGATAACTTGGTTCCAATGGAGTTAGCTCTGAAAATTGTCAACAAGATCAATGCAAATGAACGGTTTTCCGTCTATGTTGTCATACCAATGTTTCCAGAGGGGCCTCCAACTAGTAACGCTGTGCAGGAAATCTTGTTCTGGCAGAGACAGACGATGTCTATGATGTATAGCATTGTTGCAAATGCCCTTAAAAGAAAAGGTCTATCTGATCAATACCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACATCAATCCAGTAATAGGTCGGTATTTGTGCAAACAGCTGATCGTGGTCTGGCATCGGTGTACAAATATAGACGTTTCATGATTTATGTTCATGCCAAAGGCATGATAGTTGACGATCAATTTGTAATGCTGGGGTCTGCAAATATTAACCAAAGATCCTTGGACGGTTCAAGGGACACAGAAATTGCTATGGGTGCCTATCAGCCTCACAACACATGGGCAAGAAAAAATTCTCACCCACGTGGTCAGGTGTATGGTTACAGAATGTCACTCTGGGCTGAGCACCTTGGTGGTCTTGAGGATACTTTCAAGGAACCAAACAGCCTCCAATGTGTTCGCCGCGTGAATGAAATCGCCAAGAGCAACTGGGATGCATATGTATCTGAGGAGGAGAAGGAGATGAGGGGACACCTAATGAAGTATCCAATTCAGGTTGGCCATGATGGAAGAGTTAGTGCCTTGAAAGATTGGGAAAATTTCCCTGATGTTGGTGGCAAAATTCTTGGATCACACAATGCTCTTCCTGATTCACTAACCACTTAA 2577 0.4156 MSSPVEVGGRGDKPPNEGLKFGCKEPTFLYGDLDLYVLKAKNLPNLDLSSETVRKCCTMGNTCTPPFMKPHKIGSGKYHVDTSDPYVSVVVAGATVAQTRVVRNNEHPSWDEHFVVPVAHPAEKIEFVVKDDDALGAEIIGVVEIPIQKIISGRTINDWFPINGWLSNSSKGTPELHISIQYKPFGSHLSDKFGIGAVEDHPGVPNTYFPPRKGGKVTLYQDAHVPDGKLPEISLEEGKVFQQGRCWEDICHAILEARQLIYIVGWSVYHPVKLVREPTRPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHHNLFMKTDGVMQTHDEKTKKFFKHSTVHCVLAPRYASSKLSIFKQQVVGTLFTHHQKCVILDTSACEDKRKITAFIGGLDLCDGRYDTPDHRLFVDLDTIFQNDIHNPVFPSNIGVPREPWHDLHCKVEGPAAYDILTNFEQRWRKVKKLRDFKIKRMSNWHDDALLRLDRISWIVGPSSDDTGDQAVQVTDEDDPESWNVQVFRSIDSGSVKGFPKDIDQAKAQHLLCGKNLKVDKSIHTAYVKVIRSAQHFIYIENQYFLGSSYHWPSYQHAGADNLVPMELALKIVNKINANERFSVYVVIPMFPEGPPTSNAVQEILFWQRQTMSMMYSIVANALKRKGLSDQYHPQDYLNFYCLGKREHQSSNRSVFVQTADRGLASVYKYRRFMIYVHAKGMIVDDQFVMLGSANINQRSLDGSRDTEIAMGAYQPHNTWARKNSHPRGQVYGYRMSLWAEHLGGLEDTFKEPNSLQCVRRVNEIAKSNWDAYVSEEEKEMRGHLMKYPIQVGHDGRVSALKDWENFPDVGGKILGSHNALPDSLTT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0601 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Mibi06g0601 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 184 IPR035892 -
Mibi06g0601 858 SUPERFAMILY Phospholipase D/nuclease 207 465 - -
Mibi06g0601 858 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Mibi06g0601 858 SMART C2_3c 32 159 IPR000008 -
Mibi06g0601 858 Pfam PLD-like domain 562 740 IPR025202 -
Mibi06g0601 858 Gene3D Endonuclease Chain A 237 481 - -
Mibi06g0601 858 Pfam C2 domain 31 162 IPR000008 -
Mibi06g0601 858 SMART pld_4 365 400 IPR001736 GO:0003824
Mibi06g0601 858 SMART pld_4 704 731 IPR001736 GO:0003824
Mibi06g0601 858 FunFam Phospholipase D delta 237 480 - -
Mibi06g0601 858 PANTHER PHOSPHOLIPASE D 28 848 IPR015679 -
Mibi06g0601 858 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Mibi06g0601 858 ProSiteProfiles C2 domain profile. 15 160 IPR000008 -
Mibi06g0601 858 SUPERFAMILY Phospholipase D/nuclease 552 787 - -
Mibi06g0601 858 PIRSF PLD_plant 20 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi06g0601 858 Gene3D C2 domain 30 191 IPR035892 -
Mibi06g0601 858 Gene3D Endonuclease Chain A 507 756 - -
Mibi06g0601 858 CDD C2_plant_PLD 26 182 - -
Mibi06g0601 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0601 Mibi-ChrMibi06 21203500 21213956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0601 28 857 Phospholipase D Gene Family (Wang group) AT2G42010 53.140 0.0 910