Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0592 ATGGAGAGGAATTTCAGTTATTATAATCTTCACTGGATCACCAGCATGAAGAAAAGTCGCCATAATGATCACTCAAAGAAGCCTGATCATCTTGAAGGTGATATGGCTCCATCTTTCAATCTACAGAATGTTTCAAAGCTCATCCTTCCACCACTTGGTGTTTCAAGTTATAACCAGAACCCAGTTGAAACAAAAGGGTGGATCATATCCCCAATGGATACAAGATATAGGTATTGGCAGTGTGTGATGGTGCTTCTGGTGGGGTATTCAGCTTGGGTTTATCCCTTTCAAGTTGCTTTCCTGCATAGCTCTCCAAATAAGGAAGTGTTCATAGTGGACAATGTTGTTGATCTTTTCTTCGCTCTTGACATTTTTCTCACATTCTTCGTAGCTTTCATTGATCGAAGAACTCAGCTATTAGTGAGAGACTCAAAAAAGATTGCTGTGAGGTACTTGTCAACTTGGTTCGTGATGGATGTAGCATCAACTATTCCATATGAGGCATTAAGTTACATAATCACAGGCAAACATAGGGTAGGTCTTGTCTGCTACCTTCTGGGCATGCTTAGATTTTGGCGTCTCAGAAGAATGAAGCAATTTTTTACCAGGCTAGAGAAAGACATTAGATTTAGCTACTTCTGGGTTAGATGTGCAAGACTTCTCTCTGTAACACTATTTTCAGTTCATTGTGCCGGGTGCCTTTACTATCTACTAGCTGATAGATACCCTCACCAAGGGAAAACATGGATTGGGGCAGTGATACCAAATTTCAGAGAGACAAGCCTTTGGATTAGATACATTTCAGCCATGTACTGGTCCATCACTACCATGACCACCGTTGGTTACGGTGACCTCCATGCTGTCAACACTGCTGAAATGATATTCATTATCTTTTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAATATGACAAATCTTGTTGTTGAAGGAACTCGCCGAACTATGGAGTTTAGAAATAGCATTGAAGCTGCATCGAGTTTTGTGGGGCGAAATCGTTTGCCTGCGAGGTTGAAAGAGCAGATTCTGGCCTATATGTGTTTGAGATTTAAAGCAGAAAGCTTAAATCAATATCAGCTTATTGAACAACTACCAAAGTCCATTTGCACAAGCATTTGCCAGCATTTGTTTTTGCCAACAGTGGAGAAAGTCTATTTTTTCAAACATGTCTCTAGAGAAGTTCTCTTGTCCTTGGTTGCGAAAATGAAGGCAGAGTATCTACCACCTAGAGAGGATGTTATTATGCAGAATGAAGCACCAGATGATGTTTACATCATAGTGTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAAAATTGTATGGACTTTACAAACAGGGGACATGTTTGGTGAAGTTGGTGCACTTTGTTGCAAGCCTCAATACTTTACCTATAGAACTAAAACTCTCACACAGGTCTTGAGGATCAAAACCCATGATCTAATAGAAGCAATGCAAAGTAAAAGGGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGAAACTAAAAGATCTAAGTATTAGAGATTTAATGGTTGAGAATGAAGAAGAAGATGATCCAAACATGGCTGTGAACTTATTAACTGTAGCCAGTACAGGCAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACGTAGGAGACTCCAAAGGGAAAACTCCATTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTGAAAGTCTTGCTTAGGCACGCATGCAATATACATGTAAGAGATAGCAATGGTAACACTGCCTTATGGGATGCCATAGCATCAAAGCATCACTCCATATTCAGAATCCTCTACCAGCTTACTTGCCTCTCTGATCCACAAACAGGAGGTGATCTCCTGTGTACAGCAGCAAAAAGAAATGATCTAACAGTGATGAATGAGCTTTTGAAACAAGGACTGAACATAGACTCAAAAGATCGCCATGGTATGACAGCAACCCAAGTAGCCATGGCAGAGAATCATGTGGAAATGGTTCAGCTGCTTGTCATGAATGGAGCAGATGTTTCTGAAATACAAACCCATAATTTTTCTGATTCTGATTTGAATGAAATGCTGAGAAAACGTGAGACCGGGCATCGGATCATAGTACATGAGGCCACTCCCAGTGAGCATGTAGTAAGGGGAGATGAAGATGAGCAGGAGGAGCAGAGTTGGGGAAGATCTAGTGAATCAAGATTCCCAAGAGTGAGTATATATAGAGGCCACCCTGTAAACAGAAGAGACAAAAATTGCAAGGAACCCGGGAGGCTCATAAGGTTTCCTGATTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAGAAGTTTGGATTTGAAGCAAAAGATGCACTGGTGACAAATGAAGAAGGAGCAGAAATAGACTCCATTGAAGTGATTAGAGACAATGATAAACTTTTCATTGTAGCATAG 2487 0.4073 MERNFSYYNLHWITSMKKSRHNDHSKKPDHLEGDMAPSFNLQNVSKLILPPLGVSSYNQNPVETKGWIISPMDTRYRYWQCVMVLLVGYSAWVYPFQVAFLHSSPNKEVFIVDNVVDLFFALDIFLTFFVAFIDRRTQLLVRDSKKIAVRYLSTWFVMDVASTIPYEALSYIITGKHRVGLVCYLLGMLRFWRLRRMKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASSFVGRNRLPARLKEQILAYMCLRFKAESLNQYQLIEQLPKSICTSICQHLFLPTVEKVYFFKHVSREVLLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEIIDCVMEKEKIVWTLQTGDMFGEVGALCCKPQYFTYRTKTLTQVLRIKTHDLIEAMQSKREDNIQILKNFLQHFKKLKDLSIRDLMVENEEEDDPNMAVNLLTVASTGNAAFLEELLKAGLDPDVGDSKGKTPLHIAASNGHEECVKVLLRHACNIHVRDSNGNTALWDAIASKHHSIFRILYQLTCLSDPQTGGDLLCTAAKRNDLTVMNELLKQGLNIDSKDRHGMTATQVAMAENHVEMVQLLVMNGADVSEIQTHNFSDSDLNEMLRKRETGHRIIVHEATPSEHVVRGDEDEQEEQSWGRSSESRFPRVSIYRGHPVNRRDKNCKEPGRLIRFPDSLEELKRIAGEKFGFEAKDALVTNEEGAEIDSIEVIRDNDKLFIVA 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0592 828 Gene3D Jelly Rolls 363 538 IPR014710 -
Mibi06g0592 828 SUPERFAMILY Ankyrin repeat 504 702 IPR036770 -
Mibi06g0592 828 SMART cnmp_10 396 513 IPR000595 -
Mibi06g0592 828 PRINTS Ankyrin repeat signature 684 698 IPR002110 GO:0005515
Mibi06g0592 828 PRINTS Ankyrin repeat signature 572 587 IPR002110 GO:0005515
Mibi06g0592 828 ProSiteProfiles cAMP/cGMP binding motif profile. 396 515 IPR000595 -
Mibi06g0592 828 ProSiteProfiles Ankyrin repeat region circular profile. 571 602 - -
Mibi06g0592 828 Gene3D - 77 319 - -
Mibi06g0592 828 ProSiteProfiles Ankyrin repeat profile. 635 667 IPR002110 GO:0005515
Mibi06g0592 828 ProSiteProfiles Ankyrin repeat profile. 571 603 IPR002110 GO:0005515
Mibi06g0592 828 ProSiteProfiles KHA domain profile. 755 828 IPR021789 -
Mibi06g0592 828 SUPERFAMILY Voltage-gated potassium channels 71 319 - -
Mibi06g0592 828 SUPERFAMILY cAMP-binding domain-like 323 514 IPR018490 -
Mibi06g0592 828 SMART ANK_2a 604 634 IPR002110 GO:0005515
Mibi06g0592 828 SMART ANK_2a 571 600 IPR002110 GO:0005515
Mibi06g0592 828 SMART ANK_2a 635 664 IPR002110 GO:0005515
Mibi06g0592 828 SMART ANK_2a 668 697 IPR002110 GO:0005515
Mibi06g0592 828 SMART ANK_2a 538 567 IPR002110 GO:0005515
Mibi06g0592 828 FunFam Potassium channel KAT3 78 320 - -
Mibi06g0592 828 Gene3D - 540 714 IPR036770 -
Mibi06g0592 828 Pfam Ion transport protein 77 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi06g0592 828 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Mibi06g0592 828 PANTHER POTASSIUM CHANNEL AKT1 41 827 IPR045319 GO:0005249|GO:0006813
Mibi06g0592 828 Pfam KHA, dimerisation domain of potassium ion channel 754 826 IPR021789 -
Mibi06g0592 828 PRINTS EAG/ELK/ERG potassium channel family signature 113 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g0592 828 PRINTS EAG/ELK/ERG potassium channel family signature 124 133 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g0592 828 PRINTS EAG/ELK/ERG potassium channel family signature 292 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g0592 828 PRINTS EAG/ELK/ERG potassium channel family signature 310 319 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g0592 828 PRINTS EAG/ELK/ERG potassium channel family signature 266 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi06g0592 828 FunFam Potassium channel KAT2 384 520 - -
Mibi06g0592 828 ProSiteProfiles Ankyrin repeat region circular profile. 668 696 - -
Mibi06g0592 828 Pfam Cyclic nucleotide-binding domain 416 500 IPR000595 -
Mibi06g0592 828 Pfam Ankyrin repeats (3 copies) 627 696 IPR002110 GO:0005515
Mibi06g0592 828 Pfam Ankyrin repeats (3 copies) 547 625 IPR002110 GO:0005515
Mibi06g0592 828 CDD CAP_ED 396 509 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0592 Mibi-ChrMibi06 21033885 21043581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0592 1 576 Ion Channels AT4G22200 71.034 0.0 850