Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0556 ATGGAGGCCAATCACCAACACAAGCCTTTAAAGATTAAGCTTGAACGCCGAAACGCCATGAAGAACATCGATTACCAACCTTCCCCTACCACCACTTCCACCTCCTCGTACGACAACGTCGTTTCTCTCGACCTTTTAGGTCAAACCAGCTTCAGGTTAAAGGGCTATGACGGTGAATTCGACCTTATTTTTCGCGGCTTAGGACTATCTGGACCCGAAGATTTTGAAATCCCTTCAGCAGAATGGAAAGCTCGAGAGGTTTGCTCTATTCTTAGTAATAGTAACCCACTGGGTAAAAAGGCACGAGACGATGAAATTCAAATTTCAACTGAATTTCAACGCGAGGTTGGGATTAATAGTGATATAGAGATAAAAGGTAAGAACTTTCAACCTGGGGTGGAAAGGAAGATTACTGGTGCTGATTCTAATTTGAATGGTTTGGGGTCCAATCAGGATGGTGGTAGAGGAATCGAAAGTATTAGGGGGCCAATTGTTGATTGGGTTGTTGATTCACCAATTCAAGTAAGGGGCATTAGTTCTGCTGGTGAAGATGAAGTGAGGGATCCCGAAGGAAATGAAGAGGGTGTTGAGAGAGATGTCGGTGGTGGTGGTGGTGATAGTACTGGTATAGTTGATGACTCAATTCATAATGTGTCACCTAATGGGTCATTTAGATGCGTTTTCTCCTCTTGGCAAAAGGGAGAGATTCTGGGGAAGGGGTCATTTGGTACAGTTTATGAAGGATTTACTAGTGACGGGTTCTTCTTTGCTGTGAAGGAGGTTTCTTTGTTGGATCAAGGAAGCCAGGGTAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTCTTGAGTCAGTTTGAACATGAAAATATAGTTCGATATCTTGGCACAGATAAGGATGAAAGTACTCTATATATCTTCCTTGAGCTCTTAACAAAAGGGTCGTTGGCAAATCTCTATCGGACATATCATTTAAGGGATTCACAAGTTTCTGCTTACACACGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCAAATATATTGGTTGATGCTAGTGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAATTAAATGATCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCATGGTTATGGACCAGCAGCCGATATATGGAGCCTAGGATGTACAGTTTTGGAGATGTTGACACGACAGCCTCCTTACTCTGAATTAGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGTGAACCTCCACCGATTCCCGAATCAATATCGAAAGATGCCCAGGATTTTATCCATAGATGTCTACAAGTTAGCCCTGAGAAACGGCCAACTGCAGCTATGTTGTTGGAACATACATTTGTGAAGAGAAACTTCTTGCCTCCAATAAGTCCTGCTTCTCCACTTGTTCATGATTTTCAGTCTTGA 1515 0.4257 MEANHQHKPLKIKLERRNAMKNIDYQPSPTTTSTSSYDNVVSLDLLGQTSFRLKGYDGEFDLIFRGLGLSGPEDFEIPSAEWKAREVCSILSNSNPLGKKARDDEIQISTEFQREVGINSDIEIKGKNFQPGVERKITGADSNLNGLGSNQDGGRGIESIRGPIVDWVVDSPIQVRGISSAGEDEVRDPEGNEEGVERDVGGGGGDSTGIVDDSIHNVSPNGSFRCVFSSWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSIFQLQQEISLLSQFEHENIVRYLGTDKDESTLYIFLELLTKGSLANLYRTYHLRDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDLRSSKGSPYWMAPEVVNLKSHGYGPAADIWSLGCTVLEMLTRQPPYSELEGMQALFRIGRGEPPPIPESISKDAQDFIHRCLQVSPEKRPTAAMLLEHTFVKRNFLPPISPASPLVHDFQS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0556 504 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Mibi06g0556 504 FunFam Mitogen-activated protein kinase 1, putative, expressed 229 496 - -
Mibi06g0556 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Mibi06g0556 504 ProSiteProfiles Protein kinase domain profile. 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0556 504 Gene3D Transferase(Phosphotransferase) domain 1 229 495 - -
Mibi06g0556 504 MobiDBLite consensus disorder prediction 181 200 - -
Mibi06g0556 504 SMART serkin_6 231 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0556 504 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 193 487 - -
Mibi06g0556 504 Pfam Protein kinase domain 232 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0556 504 SUPERFAMILY Protein kinase-like (PK-like) 220 498 IPR011009 -
Mibi06g0556 504 MobiDBLite consensus disorder prediction 179 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0556 Mibi-ChrMibi06 20110464 20115064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0556 205 486 MAP Kinase Kinase Kinase AT4G08500 65.724 5.31e-126 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi06g0556 Pkinase 1.4e-69 CL0016