Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0555 ATGGGTAGATCAGAGGAAGAAGAAGACAAAAAGACGCAGAAAATGGATCTCTCCTTGAAGATTGATCATCATACGTCTCAACACGAAGAAGCAGATCACAAAGTAGAAGAAGATGATAATTGTAAGGAAAAAATGGCAAGAGCAGCAAAGGTTGACGAAGAAGAAGCTCCTCATGAAGCCGCCATAGCTGCAGCAGGAGATCAGATGGAAGAAGAAGATGGTGATGATAAAGTTGGTGGTGGTAGTGGTGGTGGTGGATCAATGATAGAGAATATTAAAGCAAGAGAGGAGTTAAATGTGTTACAAGTGGAGACAGATCGCATGAAACAAGAAAACAAAGTTTTAAGGGAAGTGGTGGAGCGAACCATGAAAGACTATTACGATCTTCAGATGAAATTCGCAATCATCCAGCAGAACCACAACAGCAAGCACAAGGTGCCTCATATCTCTCTCCCACTTGAAAACAAAGGTGGGGAGGAGGATAGTATAAAGAAGATTGGATTGGGATTATCACTGAGGTTAGAGACAAGTAGTGCAAGTGAAGCTGAAGATCTTCAAGAAGAGTTTAATAAGAATAATAAGGAATTATTACAAGAATTGACAAGTTTTGGGACATTATCATCATCATTTCAAAACAAAATACCTCGGACTATACTTCATCATCATCACGAGTCTTCTGGTATCAATAATGCTGGCCATGTTGCTTCTTCATCACCTCCCAATAGGAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAATCAGCCACTATGAATGATGGGTGCCAATGGAGAAAATATGGACAAAAGATTTCCAAAGGGAATCCATGTCCTCGTGCCTATTATCGTTGCACTGTTGCCCCTGGCTGTCCCGTAAGAAAACAGGTACAAAGATGCTTAGAGGACATGTCCATACTGATTACAACATATGAAGGAACACACAACCATCCACTTCCTGTAGGTGCAACGGCCATGGCTTCCACGGCTTACGCTGCTCATTACAACGCTGCCACCGCCACTGCCTTCCTCCCATCATCGTCATCAAACCCTAACAATATTAATATTGACCCTTCAAAAGGACTCGTCCTTGATCTAACCTCAATCTCTTCATCTTCTTCATCACCAGTACCATCATTTTCTTGGACAAGGCCAAACATACCTTTCAGTGTCAATAATAATATTTTCCCCACTTCTTCTTCTTCTTCTGGGGATCTTCATCAACACAATAATGTGTCTGCAATTGCTTCAGATCCTAAATTTAGGGTTGCTGTGGCCGCAGCAATAACATCCTTCATTAATAACAACAAAGATATCAATCATGGTACTCTTCATAATAATAGTAATATTAATACTTCAGAGACAACTTCGTCCACTTCTTTTGTTGGTGCTGGCAATAATAATATTATTAATAATGGAAACTCTGGTAGCAGCAGCAGCAATAGATGGATCTTAGAGTCCCTCTCTTCATCACCAAAAGAGAAAACCCATCAGTTTTAA 1494 0.4056 MGRSEEEEDKKTQKMDLSLKIDHHTSQHEEADHKVEEDDNCKEKMARAAKVDEEEAPHEAAIAAAGDQMEEEDGDDKVGGGSGGGGSMIENIKAREELNVLQVETDRMKQENKVLREVVERTMKDYYDLQMKFAIIQQNHNSKHKVPHISLPLENKGGEEDSIKKIGLGLSLRLETSSASEAEDLQEEFNKNNKELLQELTSFGTLSSSFQNKIPRTILHHHHESSGINNAGHVASSSPPNRKARVSVRARCESATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYAAHYNAATATAFLPSSSSNPNNINIDPSKGLVLDLTSISSSSSSPVPSFSWTRPNIPFSVNNNIFPTSSSSSGDLHQHNNVSAIASDPKFRVAVAAAITSFINNNKDINHGTLHNNSNINTSETTSSTSFVGAGNNNIINNGNSGSSSSNRWILESLSSSPKEKTHQF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0555 497 Coils Coil 179 199 - -
Mibi06g0555 497 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g0555 497 MobiDBLite consensus disorder prediction 1 60 - -
Mibi06g0555 497 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g0555 497 MobiDBLite consensus disorder prediction 1 87 - -
Mibi06g0555 497 FunFam probable WRKY transcription factor 31 242 319 - -
Mibi06g0555 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 90 446 IPR044810 GO:0003700
Mibi06g0555 497 SUPERFAMILY WRKY DNA-binding domain 250 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g0555 497 Gene3D WRKY domain 242 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g0555 497 Pfam WRKY DNA -binding domain 258 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g0555 497 Coils Coil 91 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0555 Mibi-ChrMibi06 20090269 20094703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0555 46 353 WRKY Transcription Factor Family AT1G68150 46.417 3.75e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi06g0555 WRKY 4.2e-24 CL0274