LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g0536	ATGGCCAATGTTTGGAGTGTGATTGAGGGGTTGAAACCGGCAATGTTAATGGCGCTGATACAGTTGACATACACCGGCATCAATGTGCTGTACAAGCTTGCCGTCAATGATGGCATGAACTTGAGAATCGTTATTGCTTATCGCTATATGTTCGCCACTGTTTTCCTTGCTCCTCTCGCTCTCATTCTTGAAAGGAATAAAAGACCAAAGATGACTTGGAGCATACTGTTTCAGGCAATTATGTGTGGGTTAATTGGAGGAGTACTGTCACAAAACTTTTACTTGGAATCATTGGCTTTAACTTCTGCAACATTTGCTTCGGCGATGGCCAATCTTACTCCAGCCGTCACCTTCATCATGGCCATCTGCTACCGTTTGGAAAGAATGAATTTAAAAACAGCAGCAGGACAAATGAAGATCATTGGAACACTAGTAGCAATAGGAGGGGCCATGATTCTAACATTCTTTAAAGGCACAAAAATAAGCACAGGTTCCTTTCACGTCACCCTCATGCATCATCTTAACGGACACGTTGCATCACTAATAGCTCCCTGTGGTATTAAGGCTCTTTTGGGAGCCCTTTGTTCTCTAGGAAGCAGTGCTACTTATGCTTTATGGCTTATCATTCAGGCTAAGATGAGCAAGAGTTACCCATGTTATTACTCAAGCACAACTTTAATGAGTTTCATGTCAGCAGTATTCTCATCTGCATTTGCCTTTTGCCTTGAGAGGGATTTGACTCAATGGAAGTTGGGTTGGGATATTAGGCTTCTTACAGTGGCCTATGCGGGAATTGTTGTTTCTGGAATTATTACGGTGCTAATTGCTTGGTGTGTGGACAAGAAAGGCCCTCTTTATGTCGCTGCTTTTAATCCACTTATGCTTCTATTTATGGCCATAGCTGGTCCTTTCATGTTGGACGAGAAGCTTTATCTTGGAAGTATAATAGGAGGGTTATTGATAGTATGTGGATTATACATGGTTCTATGGGGAAAAGGCAAGGAGATGAACAAGATAAAAAAACTTGCTCCATCAATGAGCCTTCATGAGATCATAGTGAAATCTCCGACAGAAGATAATAACAGTCATGATGAGGCTGAATTTGCTACGGATTATGACCATTCAAACATTAAAAACCAACAATTGCAAGTGAAGTAG	1158	0.4136	MANVWSVIEGLKPAMLMALIQLTYTGINVLYKLAVNDGMNLRIVIAYRYMFATVFLAPLALILERNKRPKMTWSILFQAIMCGLIGGVLSQNFYLESLALTSATFASAMANLTPAVTFIMAICYRLERMNLKTAAGQMKIIGTLVAIGGAMILTFFKGTKISTGSFHVTLMHHLNGHVASLIAPCGIKALLGALCSLGSSATYALWLIIQAKMSKSYPCYYSSTTLMSFMSAVFSSAFAFCLERDLTQWKLGWDIRLLTVAYAGIVVSGIITVLIAWCVDKKGPLYVAAFNPLMLLFMAIAGPFMLDEKLYLGSIIGGLLIVCGLYMVLWGKGKEMNKIKKLAPSMSLHEIIVKSPTEDNNSHDEAEFATDYDHSNIKNQQLQVK	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g0536	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	157	-	-
	Mibi06g0536	385	Pfam	EamA-like transporter family	14	142	IPR000620	GO:0016020
	Mibi06g0536	385	Pfam	EamA-like transporter family	191	329	IPR000620	GO:0016020
	Mibi06g0536	385	PANTHER	WAT1-RELATED PROTEIN	12	343	IPR030184	GO:0016020\|GO:0022857
	Mibi06g0536	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	232	334	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g0536	Mibi-ChrMibi06	19400064	19403468	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g0536	11	370	Nodulin-like Gene Family	AT1G25270	38.889	1.78e-91	277