LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g0522	ATGATGAAGAACTTATGTGAGGTTGTGGATGGGTTGAAACCAATCATACTAATGTTGGCGGTTCAACTATTTTATGTTGGGGTTAATGTTCTTTACAAACTTGTGGTCTATGACGGCATGAACTTGCGAATTGTGATTGTTTATCGTTTTGTTTTCGCTACTGCTTTCATGGCTCCTCTTGCTTTCATTTTTGAAAGGAAGAAAAGGCCAAAGATGACTTGGACTATATTATTTCAGGGGCTTATATCTGGCCTGTTTGGAGGGACATTGGCACAAACATTATACGTGGAGATGTTGGCCCTAACAACAGTGACGTTTGCATCATCAGTGAACAATCTCCTTCCAGCAGCTACCTTTGTTTTGGCCCTCTTCTTCGGATTGGAAAAATTGAATTGGAAAGCAGCAGCTGGGAGAGTCAAGATCATTGGAACCTTTGCTGGAACCAGTGGAGCCATGTTGCTAACATTCTACAAAGGTGCACGAATACCCACTCCCTCCTTCCACGTCAGCATTTTGCATCCCCACAACAGCCACGTGGCATCTTCCCATTCTTCCTCAGGTAGTAGCACACTCTTGGGTGCACTATGTGGCTTGGGATTCATCTTGTCTTTTTCTTTGTGGCTCATCGTCCAGAGTAAGATGAGTGAGAGGTATCCGTGTTACTCAAGCACGACATTGATGAGTTTGGCAGCGTCGGTGTTTTCTATTGGCTTTGCTCTTTGTACTGAAAGGGATTGGAGTCAATGGAAATTGGGATGGAACATAAGGCTTTTAACGGTGGCTTATGCGGGACTAGGGCCAGCAGGGTTGAATGTGGTGATGATTGCATGGTGTGTAAGAAAGGGAGGGCCACTATTCGTGTCTGCATTTAATCCTCTTCAGCTTTTGCTTTTGGCTTTTGTTGGATCATTTTTCATGGACGAGATGCTTCATCTTGGAAGTATAATTGGAGGAGTGCTGATAGTGTGTGGATTATATATGGTTTTATGGGGAAAAGGCAAAGAGATGAAGAGGCTGAATCTTTTAGGTGTACCATCACAGACCCTCCAAGTGTCATCCTCTTCAGTTGAAATCATCGTCAAATCTTCTACTGATGATGACAAAAACAACAACGACAATAATATTAGTACTTCAAACTGTGTGGATAAGGATCACCAAGATTTATCAGAAAATGAAAATTAA	1182	0.4247	MMKNLCEVVDGLKPIILMLAVQLFYVGVNVLYKLVVYDGMNLRIVIVYRFVFATAFMAPLAFIFERKKRPKMTWTILFQGLISGLFGGTLAQTLYVEMLALTTVTFASSVNNLLPAATFVLALFFGLEKLNWKAAAGRVKIIGTFAGTSGAMLLTFYKGARIPTPSFHVSILHPHNSHVASSHSSSGSSTLLGALCGLGFILSFSLWLIVQSKMSERYPCYSSTTLMSLAASVFSIGFALCTERDWSQWKLGWNIRLLTVAYAGLGPAGLNVVMIAWCVRKGGPLFVSAFNPLQLLLLAFVGSFFMDEMLHLGSIIGGVLIVCGLYMVLWGKGKEMKRLNLLGVPSQTLQVSSSSVEIIVKSSTDDDKNNNDNNISTSNCVDKDHQDLSENEN	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g0522	393	Pfam	EamA-like transporter family	13	142	IPR000620	GO:0016020
	Mibi06g0522	393	Pfam	EamA-like transporter family	192	329	IPR000620	GO:0016020
	Mibi06g0522	393	PANTHER	WAT1-RELATED PROTEIN	14	346	IPR030184	GO:0016020\|GO:0022857
	Mibi06g0522	393	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	230	334	-	-
	Mibi06g0522	393	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	48	142	-	-
	Mibi06g0522	393	MobiDBLite	consensus disorder prediction	362	393	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g0522	Mibi-ChrMibi06	18454770	18468597	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g0522	12	384	Nodulin-like Gene Family	AT1G25270	39.200	2.10e-91	277