Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0511 ATGGCTCCTTATTCTCAGGACCCCTTCAGTCCTCTCCATTTCTACAAATTCATCGCAAAAACCAATCTTGAAACCATTATGATTCCAAGCAAATTTACAGGGAGATATGGAAGATGCTTGTCCAACCCTGTGTTTCTGAAGTCTCCCGATGGTAAAAAATGGATTGTGCATTGGACAAAATGTGATAAAGAGATTTGGCTTTTAAAGGGATGGAAGGAATTTACTAAATTTTACTCTCTAGATGTTGGTTATTTGGTTCTGTTCAAATATGAAGGAAGTTCTCAGATTGGTGTGCACATAATTGACAACAGTGGCCTAGAAATAGACTATCCTTGGTCTATGGACGACGCCTCTAATCAAGAGGACAACCTTGATAATGTCAGTGACGATACAATTGTAATATTGGATGATATGCCCCCAAGCCTTGAGGAAAACCTTGATAATCTCGGTGATGATACAATTGAAATCTCGGATGAGATGCCTCAAAGCCATAAGGCTAATAACAATATGCCCTTGTCACCTTCTAGGCCTCTTAAGAAAATGAGAAGTCCTACAGATGAAGATGTCGAAATGAGAAGCTTCAATCTGCAGAATATGCTGGTGGGCCCAAAAACTACAGGCATGAAATTTCAAGGAACAAAACTTCAGAAATCGAGTAATGCAAACTTCAAATTTTCAAAGAAGAAATCTGAAGAATTAACTATGGTCTTTGATCTCACTATTTTTATCTTCTCTTCACAGCCGATGCCAAAAGAATTTGCTGCAAAACATTTGAACCAAGAGTGTGAAGTTGTGAAACTTCAGACCTTGGATGGGAGAATTTGGCATGCTAAGTATAAGATTCCCAAAATTGGAAAAGGCTGGAGGAAGTTTGTGAAGGAAAATGGTTTGAAGGTGGGGCATGTTTGCGCATTTGAAATGATTGATCATTCGTCATTCAAAGTACATAATCTAACAGATGCTGATAAAGATAAACTGAAAGTTGACTCTTCTGAAAAGAAGCAGAGAAGCAATATGCTAGATTCACCTCTTGAAAAGGATAGCCCTTCCCAAGATGAAAACCCTCATTTTAAGCAGAGCAGCAGTATGCAAGATCCACCTCTTGAAAAGGCTAGCTCTTCCCAATCCGAAAATCCTCACTTTGAGCAGAGAAGTAGTATGCTAAAACCACCTCCTCTCAAGGCTAGCTCTTTCCAATCTAAAAAGCTTTCTTTTACCGTAATGATGACTCATGCTCACATTCATGGCACATCATACGTGAATGTGTGGTTTGAATTGGCAAAAGCACATCTTCGTAATAATACTAAGAGTGTCACACTTAGTGTACAAGATAAAGATTGGACTGTTGGGTATGGATACAGAAATAATACTAAACAACAAAGTGCTGAGTTTTCTTGGGGATGGAAGCAATTCTGCAAAGATAATGACTTGAAAGTAGGCGATGTTTGCGAGTTTGAGCTCACTCAGAAATTCAAATTTCAAGTGACAATTTTTCGCGGCTAA 1503 0.3866 MAPYSQDPFSPLHFYKFIAKTNLETIMIPSKFTGRYGRCLSNPVFLKSPDGKKWIVHWTKCDKEIWLLKGWKEFTKFYSLDVGYLVLFKYEGSSQIGVHIIDNSGLEIDYPWSMDDASNQEDNLDNVSDDTIVILDDMPPSLEENLDNLGDDTIEISDEMPQSHKANNNMPLSPSRPLKKMRSPTDEDVEMRSFNLQNMLVGPKTTGMKFQGTKLQKSSNANFKFSKKKSEELTMVFDLTIFIFSSQPMPKEFAAKHLNQECEVVKLQTLDGRIWHAKYKIPKIGKGWRKFVKENGLKVGHVCAFEMIDHSSFKVHNLTDADKDKLKVDSSEKKQRSNMLDSPLEKDSPSQDENPHFKQSSSMQDPPLEKASSSQSENPHFEQRSSMLKPPPLKASSFQSKKLSFTVMMTHAHIHGTSYVNVWFELAKAHLRNNTKSVTLSVQDKDWTVGYGYRNNTKQQSAEFSWGWKQFCKDNDLKVGDVCEFELTQKFKFQVTIFRG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0511 500 MobiDBLite consensus disorder prediction 325 395 - -
Mibi06g0511 500 ProSiteProfiles B3 DNA-binding domain profile. 11 104 IPR003340 GO:0003677
Mibi06g0511 500 SMART B3_2 14 104 IPR003340 GO:0003677
Mibi06g0511 500 SMART B3_2 241 322 IPR003340 GO:0003677
Mibi06g0511 500 SMART B3_2 405 500 IPR003340 GO:0003677
Mibi06g0511 500 CDD B3_DNA 404 499 IPR003340 GO:0003677
Mibi06g0511 500 CDD B3_DNA 22 102 IPR003340 GO:0003677
Mibi06g0511 500 SUPERFAMILY DNA-binding pseudobarrel domain 248 317 IPR015300 -
Mibi06g0511 500 MobiDBLite consensus disorder prediction 325 353 - -
Mibi06g0511 500 CDD B3_DNA 249 316 IPR003340 GO:0003677
Mibi06g0511 500 PANTHER B3 DOMAIN-CONTAINING 241 494 - -
Mibi06g0511 500 Gene3D - 9 105 IPR015300 -
Mibi06g0511 500 MobiDBLite consensus disorder prediction 162 182 - -
Mibi06g0511 500 ProSiteProfiles B3 DNA-binding domain profile. 405 500 IPR003340 GO:0003677
Mibi06g0511 500 Pfam B3 DNA binding domain 249 314 IPR003340 GO:0003677
Mibi06g0511 500 Pfam B3 DNA binding domain 22 102 IPR003340 GO:0003677
Mibi06g0511 500 Pfam B3 DNA binding domain 416 499 IPR003340 GO:0003677
Mibi06g0511 500 SUPERFAMILY DNA-binding pseudobarrel domain 10 104 IPR015300 -
Mibi06g0511 500 ProSiteProfiles B3 DNA-binding domain profile. 232 321 IPR003340 GO:0003677
Mibi06g0511 500 Gene3D - 392 500 IPR015300 -
Mibi06g0511 500 Gene3D - 209 322 IPR015300 -
Mibi06g0511 500 MobiDBLite consensus disorder prediction 354 383 - -
Mibi06g0511 500 SUPERFAMILY DNA-binding pseudobarrel domain 399 499 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0511 Mibi-ChrMibi06 18211601 18215634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0511 249 499 B3 DNA Binding Superfamily AT3G18990 20.690 2.13e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi06g0511 B3 1.7e-12 CL0405