Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0494 ATGGGTTGTATATGCTCGAAAGGGAGGAAATCACCAAATAACTATGTTGCTGAGAACCATGCCAGAGACAAGGATACGAAGGCAAATAGAATATCAAAACATTTGAGTTCTGGGGAGAGGGTAGCAGTAGAGGCTGATGGTAATGGTAATGATGTGACTACAAGGTTGATATCTAATCCGTCTGGGGGTGGAACTTCAGGGTCTGCTTCCGGGTCATCAGATGAGGGGGAGAAGAATGGAGAGGCAGAAACTACTGCAAAGCCTGCAAAACAGCTTGTTCATATGGCCTCAAACATGGGAATTGGAAATGGAGGACAGGGACAAGCTAAGATGGCTAGTATAGTTACTGTACCTAAAGGGGAGAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCAGGGGAAGCCATTAATGGTTGGATACCTCGCAGAGCAGACTCATATGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTTTACAGAGCTCGTGATCTAGAAACAAACAAAATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATTATTGTTCTGCGAAGGCTTGATCATCCGAATGTCATGAAACTTGAAGGCATCATTACTTCTCGGGTCTCAGGTAGCTTGTATCTCGTTTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTAGCATCAAGTTCACTGAAGAGCAGATCAAATGTTATATGCAACAGCTGCTTCGTGGTATTGAGCACTGCCACAGTCATGGTGTTCTGCATCGAGACATCAAGGGTTCAAATCTTCTGATTGACAAGAATGGCAATCTAAAGATTGGTGATTTCGGGCTAGCAACTTTTTTTGAGCCCTCTAAGGCTCAGGTTTTTACAAGTCGTGTGGTAACCTTGTGGTATCGACCACCTGAACTCCTACTGGGAGCCACAAATTATGGAGTTGCAGTGGACTTGTGGAGTGCTGGTTGCATTCTCGCGGAGTTGTTATCTGGAAAGCCTATAATGCCTGGCCGAACAGAGGTGGAGCAACTTCACAAAATCTTCAAACTCTGTGGATCACCATCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACCATTTTCAAGCCTCAACATCCTTACAAACGTGTTGTTGCTGAGACATTTAAGGATTTTCCTCCATCAGCATTAAGCCTTTTGGAAGTCCTCCTTGCTATTGAACCTGAGGATCGAGGAACTGCTTCTTTAGCACTTCAGAGTGAGTTCTTTACCACAAAGCCCCTTCCTTGTGATCCTTCAACTTTGCCAAAATATCCACCAAGTAAGGAGTTTGAGGTCAAGTTTCGACAAGAAGAAGCCAGAAGACGAAGGGCTGCAAATAATAAAGGAAATGCAGAGGAATCAGCTAATAAGGTTTCCAAAGAATCTAAAGCTGTTCCGGCGCCTGATGCTAATGCTGAGTTACGGTCATCAATTGAGAAGAGACAAGGGCAGGCTAACCCTAAATTTATCAGTGAGAAGTACAATCCTGATGAGGATAGTGGTTCTGGCTTCCCTATTGAACCTTCAAAGACAAGAGCACTCAATGCATTCTCTCATTCTGGTCAGTCAATGCATCCAAGTGTATATGGTTCTTCACGCAATATGAATTCGAATAAGGAAGAGCCTATTGCTGGCCCTGGCCATGTCTATGATTCGGGAAATCCTGCAGAGTTGAGAAAACAGAGATCCTATATGAACAGCAATGCGGCCCAATTGTCAAGATTCTCTAATTCAGTTGCCAATGGAGGTGGTTTAAAGCTCGATATGAGTGGAGATGCTAGTGTGAGTTCACAGTGGCCTGACGATTGCTTTGGCACACGATATGACCATCTTGTTGATGATGAATCCAACCAATTGCTCAAGTCTTTACACAAGAAAGACATACACCCTTCCGCAAAGGAGCCTTCCAAGGCGTTTGCCCCGAAAAATGGTCAAATGTATTATTCAGGGCCACTAGTCCCTGGAGGTGAAAATCTTGATGAAATGCTTAAGGAGCATGAAAGGAAAATCCAACAAGCCGTCCGCAAGGCACGCTTGGATAAGGTCAAGATCAGTAAATGTGACAAGGACAAAGGCCAAACTGAATCCCTACTGCACCACCATGTGTGA 2193 0.4423 MGCICSKGRKSPNNYVAENHARDKDTKANRISKHLSSGERVAVEADGNGNDVTTRLISNPSGGGTSGSASGSSDEGEKNGEAETTAKPAKQLVHMASNMGIGNGGQGQAKMASIVTVPKGERGAQVLAGWPSWLTAVAGEAINGWIPRRADSYEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLSATPSIKFTEEQIKCYMQQLLRGIEHCHSHGVLHRDIKGSNLLIDKNGNLKIGDFGLATFFEPSKAQVFTSRVVTLWYRPPELLLGATNYGVAVDLWSAGCILAELLSGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEVLLAIEPEDRGTASLALQSEFFTTKPLPCDPSTLPKYPPSKEFEVKFRQEEARRRRAANNKGNAEESANKVSKESKAVPAPDANAELRSSIEKRQGQANPKFISEKYNPDEDSGSGFPIEPSKTRALNAFSHSGQSMHPSVYGSSRNMNSNKEEPIAGPGHVYDSGNPAELRKQRSYMNSNAAQLSRFSNSVANGGGLKLDMSGDASVSSQWPDDCFGTRYDHLVDDESNQLLKSLHKKDIHPSAKEPSKAFAPKNGQMYYSGPLVPGGENLDEMLKEHERKIQQAVRKARLDKVKISKCDKDKGQTESLLHHHV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0494 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mibi06g0494 730 Coils Coil 684 704 - -
Mibi06g0494 730 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Mibi06g0494 730 SUPERFAMILY Protein kinase-like (PK-like) 146 445 IPR011009 -
Mibi06g0494 730 MobiDBLite consensus disorder prediction 465 535 - -
Mibi06g0494 730 PANTHER CELL DIVISION PROTEIN KINASE 151 443 - -
Mibi06g0494 730 SMART serkin_6 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0494 730 CDD STKc_CDK9_like 153 437 - -
Mibi06g0494 730 MobiDBLite consensus disorder prediction 465 487 - -
Mibi06g0494 730 Gene3D Transferase(Phosphotransferase) domain 1 236 477 - -
Mibi06g0494 730 ProSiteProfiles Protein kinase domain profile. 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0494 730 Gene3D Phosphorylase Kinase; domain 1 140 235 - -
Mibi06g0494 730 MobiDBLite consensus disorder prediction 51 75 - -
Mibi06g0494 730 FunFam probable serine/threonine-protein kinase At1g54610 236 477 - -
Mibi06g0494 730 MobiDBLite consensus disorder prediction 16 40 - -
Mibi06g0494 730 Pfam Protein kinase domain 153 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g0494 730 MobiDBLite consensus disorder prediction 1 87 - -
Mibi06g0494 730 FunFam probable serine/threonine-protein kinase At1g54610 140 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0494 Mibi-ChrMibi06 17789707 17794318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0494 145 581 Core Cell Cycle Gene Families AT5G10270 43.886 2.35e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi06g0494 Pkinase 7.6e-71 CL0016