Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0487 ATGTCTAACGTCCGAGCGCAGGAGTATTCTAGGATGAGCATTTCACCTTCGGAAGAACGCCAGCACTGTAAGACGCTGCCCCATTTTCCAATATCTATCACCCTTTCAACTTGTTTACATTTTGATGAGAACTTGCCTTCTCTTACTAGCTTAAATTTCCTTATACAAATCCTTCATGCATGGAAAGGTAATAAACAGGCTTACAAGACTCTCATTGCTGCTGAGTACAGCGGTGTGGATGTCAAATTGGCCCCAAATTTTGAGATGGGTGTTTCCAACAAAACACCTGAATTTCTCAAGATGAATCCTATTGGCAAGGTTCCTGTGTTGGAAACACCAGAAGGTCCAGTTTTTGAGAGTAATGTCATCGCTCGCTATGGTAAAGAAATATATACAAAAAATGTTGAAATTGTTCATTCAAGGGGGCATGTTTTACGTGTGTTTTGTTGTGTTGGTGCAGTTGTTCGGTTGAAGGGTGACAATGCATTGTATGGATCTTCTCTAATGGACTATGTTGAAGAAGCTGCAATTTCTTCACTGAAGAGAGCATTGGGTGCATTGAACACTCACCTGGCTTCTAATACCTATCTGGTCGGGCATTCTGTGACACTAGCAGACATTATTCTGACATGCAGTTTGCTTAAGGGTTTCACTCAGCTCATGACCAAGAGTTTCACCTCAGAATTTCCTCATGTTGAGAGATACTTTTGGACATTGAAGCCCAAAGAGCCTTCTGAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGGCCCCTAAAGAGGCAGAAAAGCCCAAAGAGGCCGAAGAGGAGGAGACATCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATCTTGGATGAGTGGAAAAGACTCTATTCGAACGCCAAGACTAACTTCCGTGAGGTTACAATCAAAGGATTCTGGGACATGTATGATCCTGAGGGATACTCTCTCTGGTTCTGTGAGTACAAATACAATGATGAAAATACTGTTTCCTTTGTGACTATGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTTTCCCGCAAATATGCATTTGGGAAAATGCTTGTGATTGGATCTGAGCCGCCATTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAACAAATACCACAATTCTTAATTGATGAATGCTATGACATGGAACTCTATGAATGGAGAAAAGTTGATATCTCGGATGAAGCTCAAAAGGAGCGTGTGAATAAGATGATTGAAGATTGCGAGCCTTTTGAGGGTGAGCCTCTCTTGGATGCCAAGTGCTTCAAGTAA 1314 0.4239 MSNVRAQEYSRMSISPSEERQHCKTLPHFPISITLSTCLHFDENLPSLTSLNFLIQILHAWKGNKQAYKTLIAAEYSGVDVKLAPNFEMGVSNKTPEFLKMNPIGKVPVLETPEGPVFESNVIARYGKEIYTKNVEIVHSRGHVLRVFCCVGAVVRLKGDNALYGSSLMDYVEEAAISSLKRALGALNTHLASNTYLVGHSVTLADIILTCSLLKGFTQLMTKSFTSEFPHVERYFWTLKPKEPSEPKKEAQPKKEAPKEAEKPKEAEEEETSKPKPKNPLDLLPPSKMILDEWKRLYSNAKTNFREVTIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTMNKVGGFLQRMDLSRKYAFGKMLVIGSEPPFKVKGLWLFRGQQIPQFLIDECYDMELYEWRKVDISDEAQKERVNKMIEDCEPFEGEPLLDAKCFK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0487 437 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 277 437 IPR001662 GO:0003746|GO:0006414
Mibi06g0487 437 CDD GST_N_EF1Bgamma 58 126 - -
Mibi06g0487 437 SMART EF1G_2 276 384 IPR001662 GO:0003746|GO:0006414
Mibi06g0487 437 Gene3D Glutaredoxin 55 126 - -
Mibi06g0487 437 SUPERFAMILY eEF1-gamma domain 277 437 IPR036433 GO:0003746|GO:0006414
Mibi06g0487 437 Pfam Glutathione S-transferase, C-terminal domain 179 237 IPR004046 -
Mibi06g0487 437 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 54 135 IPR004045 -
Mibi06g0487 437 SUPERFAMILY GST C-terminal domain-like 161 240 IPR036282 -
Mibi06g0487 437 FunFam Elongation factor 1-gamma 1 277 437 - -
Mibi06g0487 437 FunFam Elongation factor 1B gamma 55 126 - -
Mibi06g0487 437 MobiDBLite consensus disorder prediction 243 284 - -
Mibi06g0487 437 Pfam Glutathione S-transferase, N-terminal domain 60 126 IPR004045 -
Mibi06g0487 437 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 137 257 IPR010987 -
Mibi06g0487 437 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 242 437 IPR044628 GO:0004364
Mibi06g0487 437 MobiDBLite consensus disorder prediction 243 277 - -
Mibi06g0487 437 Gene3D - 165 247 - -
Mibi06g0487 437 SUPERFAMILY Thioredoxin-like 51 129 IPR036249 -
Mibi06g0487 437 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 277 437 IPR036433 GO:0003746|GO:0006414
Mibi06g0487 437 Pfam Elongation factor 1 gamma, conserved domain 276 383 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0487 Mibi-ChrMibi06 17481927 17484960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0487 57 437 Eukaryotic Initiation Factors Gene Family AT1G57720 59.091 7.39e-175 494