Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0480 ATGGAACAACAACAACATCAGCAGCATCTTCTGCAGCAGAATAATCAGTTACAGGTTAAGGTCCCTTTCAATGGAGAACAAGGTCAAGGAGAAGAAGATCTCTCATGTATCATCAATGCGGGCCCCACCTCCCTCCAAGCTGCCCTCTCTCCTGCTAGCGGTGGTATATCATCATCTTTTACTTCCTCTTCATCCTCCTCCTCCTCCTCCTCAACTCCGGTCCCACTCGGCGTCCACTCGCCGCTCGCCGTCGCCGGATCCGGTGGGACCGCGCTCGATTCGACCGGGACACAAAAACAAGCGGTCGGCGACGCCGCCGTCGTTGCTCCGGCGCCGGCGCCGGCGAAGGACAGGCACGTCAAGGTGGAAGGGCGCAGCCGGAGAATCCGGATACCAGCGGCGTGTGCGGCTAGGGTTTTCCAGTTGACCGGAGAGCTAGGCCTGAAGTCCGACGGAGAAACAGTGGAGTGGCTCCTCCAACAGGCGGAGCCCGCCATCATCGCCGCCGCCGGCACCAGCACCGGAACCACCGCCACGAGCTTCCCGATGAAGACGACGGCGGCGGCGGCGGCGCCACTCGTCCACGTGTCGTCCCCTCATTGGAGTAGCGGCTCTTCCACCGTCTTGGCTCCCCCAACAATGTCAGCTCCTCATACATTACTCCACGGAGTCCTACCTCCTCCTCCTTCCAACAACATTCATCACCGACCTTATCAACATCCATTTCTACAACATTCTACTTCGTTAACGCATCATCAGCAGCAGCAACAGGAGAATCGTCGCCATTATCATCCTCATCAGCTTCCTAATGCTGATGATGGAACGGAGAATAGTTTGATGAGGAAACGATTCAGAGAATTATATGATAATCAAAATCTGCAATTACACAAGGAGCAAACACAACATCATCCGCAAAAAGGTGGACCTTCTTCAACTTCGAGCTTGAACAGCGTGTTTCGTCCACCAACCAATTTCCTCCCTACCACCCCAATGTGGGTGGTCCCTAGCGGCGACGGAGGCGCAGTTAGCAGCACCTATTGGATGCTGACCTCCGAAGGAAGTGGCGGTTCCGTGTCGTTTCAGACTGGCGGCGGCGGCGGCGGCGGAGGAATCGTTGTGAGTAACTTACTAGCTGGTTCGGTGCCGTTCATTTCGAGTTCTAGTTTCTCCCAGGGGAGTACTGTGGGATTTCAGGGTTTGCATCATGTGGCACCAACGACGACGACGACGACGACGTCGTTCTTGGTGCAGAGTCAGAATCAGAATCAGCAGACTGAGATGACGACGGATGATCAGTCGAATTTGGCTGATGGATTGAGTGCGTTATGTGGTGGTGTTGAGAGTACTAATACAGTTGATTTTGATTACCTTCCTGAAGCTGGTGGTATTGGAGAAGGTGGTGGCAACAGTTCTGAATGA 1419 0.5455 MEQQQHQQHLLQQNNQLQVKVPFNGEQGQGEEDLSCIINAGPTSLQAALSPASGGISSSFTSSSSSSSSSSTPVPLGVHSPLAVAGSGGTALDSTGTQKQAVGDAAVVAPAPAPAKDRHVKVEGRSRRIRIPAACAARVFQLTGELGLKSDGETVEWLLQQAEPAIIAAAGTSTGTTATSFPMKTTAAAAAPLVHVSSPHWSSGSSTVLAPPTMSAPHTLLHGVLPPPPSNNIHHRPYQHPFLQHSTSLTHHQQQQQENRRHYHPHQLPNADDGTENSLMRKRFRELYDNQNLQLHKEQTQHHPQKGGPSSTSSLNSVFRPPTNFLPTTPMWVVPSGDGGAVSSTYWMLTSEGSGGSVSFQTGGGGGGGGIVVSNLLAGSVPFISSSSFSQGSTVGFQGLHHVAPTTTTTTTSFLVQSQNQNQQTEMTTDDQSNLADGLSALCGGVESTNTVDFDYLPEAGGIGEGGGNSSE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0480 472 MobiDBLite consensus disorder prediction 255 269 - -
Mibi06g0480 472 MobiDBLite consensus disorder prediction 247 276 - -
Mibi06g0480 472 Pfam TCP family transcription factor 115 286 IPR017887 -
Mibi06g0480 472 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 433 IPR005333 GO:0003700
Mibi06g0480 472 MobiDBLite consensus disorder prediction 298 321 - -
Mibi06g0480 472 ProSiteProfiles TCP domain profile. 115 169 IPR017887 -
Mibi06g0480 472 MobiDBLite consensus disorder prediction 48 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0480 Mibi-ChrMibi06 17356978 17359001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0480 114 361 TCP Transcription Factor Family AT1G35560 37.402 5.57e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi06g0480 TCP 1.2e-27 No_clan