Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0469 ATGGAAGTAAAAAGAGTGCGATTGCCTCGAGTACTTCAAACTTCCCCAAGAAACATCATTGGTGCAAGCAAAGCATCCCGCCTTTCTGGCACCATCCTCCTCCTCCTCCTTCCTCTTCCAATTAAATGCCCTCAAAATTCAAAAAAACCCCAAAAAAAAAAAAACAAAGAAAGAAAGAAAGAAAAGGAAACCCTCCCAGAATTTAATGCAGCAGCTGAGATTCCCACCCACCCCTTCCTTTCCCCCCTCCAAAATTCCCTCCCCAAATTCCCTCTCATCCCTCCCCTTCTTCTTCCTCCTCCTCCTCCTCCTACTCCTCCCTCAAATGGACACTTTCACTACCTCACTCTCTCACTCTCATTTTCCCCTCTTTTTCCCATTATGCCCCTCTTCGTCAACATTGGCTTTGGCTACTCCATCGCCATCGCCCTCGCTTTCCTCTTCCTCGCCTCCGCCCTCATCCTCTCCTTCTACCTCTGCTCCCGCAAACGCACCCTCCAAGACCCGAACCAAGCTCCGAACCTGAACCCGAACCCGAACCCGAACCACCCACCATCCGACGGCATTGTCCTGCCACGTGTCATTTTTGTGGCGGAAGAGGAAGAAGACGAAAACGACAACGCCGTTATGGGGCTTGACGACAACGTTATAAACTCGTACCCGAGGTTTCAGTATAGTAGGGGTGTTATGGGTGTGGGGAGCAGTACAATGTGCTCGATCTGTTTGTGTGAGTATAGGGATTCGGAGATGTTAAGGATGATGCCTGAATGTCGTCACTATTTTCACCTTTTGTGCCTTGATTCTTGGCTTAAGCTTAATGGATCTTGCCCTGTTTGTCGGAATTCGCCTCTCATGACTCCGATTTCTACGCCTTTGCAAGAAGTCGTTCCGCTTTCTCAGTATCCCGCTGATCGGAGACGACGGAGGTGA 930 0.4968 MEVKRVRLPRVLQTSPRNIIGASKASRLSGTILLLLLPLPIKCPQNSKKPQKKKNKERKKEKETLPEFNAAAEIPTHPFLSPLQNSLPKFPLIPPLLLPPPPPPTPPSNGHFHYLTLSLSFSPLFPIMPLFVNIGFGYSIAIALAFLFLASALILSFYLCSRKRTLQDPNQAPNLNPNPNPNHPPSDGIVLPRVIFVAEEEEDENDNAVMGLDDNVINSYPRFQYSRGVMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDSWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0469 309 CDD RING-H2_PA-TM-RING 238 280 - -
Mibi06g0469 309 ProSiteProfiles Zinc finger RING-type profile. 238 280 IPR001841 -
Mibi06g0469 309 PANTHER RING-H2 FINGER PROTEIN ATL67 127 308 IPR044289 GO:0016567|GO:0016740
Mibi06g0469 309 Pfam Ring finger domain 237 280 IPR001841 -
Mibi06g0469 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 284 IPR013083 -
Mibi06g0469 309 SMART ring_2 238 279 IPR001841 -
Mibi06g0469 309 MobiDBLite consensus disorder prediction 45 64 - -
Mibi06g0469 309 SUPERFAMILY RING/U-box 237 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0469 Mibi-ChrMibi06 17114417 17115346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0469 135 306 C3H Transcription Factor Family AT2G35910 37.791 3.32e-30 112