Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0464 ATGGCAACTGTAGCAACCTCATCCTCATCTCCCACCATGAGCCTCAGTCAAAGCCAAAGCCAAAGCCAAGGCCACAGCCACGACGACACCACCACAACCGCCGCCACCAATGGCCTCAACCGCCCCGACCACCACGACAACGACGGCGACGACGACAACCACAAGCACGACATGGTCATGCCCGGCTTCCGCTTCCACCCAACTGAAGAAGAACTCATCGAATTCTACCTTCGCCGGAAAGTTGAAGGCAAGCGTTTCAACGTCGAGCTCATCACCTTCCTCGATCTCTATCGCTACGATCCATGGGAACTTCCTGCTATGGCGGCGATGGGAGAGAAAGAGTGGTACTTCTATGTTCCAAGGGATAGGAAGTATCGGAACGGTGACCGGCCGAATAGAGTGACGACGTCGGGGTATTGGAAGGCGACCGGAGCTGATAGGATGATTAGAGCAACTGAAAGTTCAAGGTCAATTGGGTTGAAGAAAACCTTAGTTTTTTATTCAGGTAAAGCTCCAAAAGGGATTAGAACAAGTTGGATTATGAATGAGTATCGCTTGCCTCACCATGAAACCCAACGCTTCCAAAAGGCTGAGATATCTCTGTGTAGAGTGTACAAGAGACCTGGGGTAGAAGACCATCCCTCTCTTCCTCGCAATCTCCCAACAAGACTCTCCTCATCAGATAAGAATCATTACAACAATAAGCACAACATCAACAACCTTGTTCCAGACATGTTTCATCATCATCAAAACATGGGTTTTCTAGAACAACCTCATCAAAATCATCATCATCATCAGCATCGTCAAGATCAGCAAATTACCAACGAAACCGATCAGGGAAGCAGTAGCAGTACAACAGCTACTACAACTACTACTACCAACAATAATTCCACATTAATGATGGATGATCTGAATAGGCTAATGACTTATAATTATAATAATAGTAATAATAATAACCAACAATATTTACAATACTATAACAGTGGTATTACTAGTCCTCCTCCACCTCCTGAAAACCATCCTAACCATCATCATCTTCCTCATTATGTTCATCATCATCACCATCATCTTCAGTTCTCTAATCTGCTATTACAGCAGCAGCAGCCGCAAGTAGTTCAACAACAACAACCAATTGTGGCTCTGAATAGTTCGCTTCCCATTGCATCTTTCACTGACAGATTGTGGGAGTGGAATCCATTAATACCTGAAGCTACCAACCGAGAGTTCAGCAACATGTCTTTTAAGTAA 1248 0.4487 MATVATSSSSPTMSLSQSQSQSQGHSHDDTTTTAATNGLNRPDHHDNDGDDDNHKHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAMGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRATESSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRFQKAEISLCRVYKRPGVEDHPSLPRNLPTRLSSSDKNHYNNKHNINNLVPDMFHHHQNMGFLEQPHQNHHHHQHRQDQQITNETDQGSSSSTTATTTTTTNNNSTLMMDDLNRLMTYNYNNSNNNNQQYLQYYNSGITSPPPPPENHPNHHHLPHYVHHHHHHLQFSNLLLQQQQPQVVQQQQPIVALNSSLPIASFTDRLWEWNPLIPEATNREFSNMSFK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0464 415 MobiDBLite consensus disorder prediction 219 234 - -
Mibi06g0464 415 MobiDBLite consensus disorder prediction 1 40 - -
Mibi06g0464 415 SUPERFAMILY NAC domain 59 207 IPR036093 GO:0003677|GO:0006355
Mibi06g0464 415 Pfam No apical meristem (NAM) protein 61 186 IPR003441 GO:0003677|GO:0006355
Mibi06g0464 415 MobiDBLite consensus disorder prediction 1 60 - -
Mibi06g0464 415 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 57 294 - -
Mibi06g0464 415 MobiDBLite consensus disorder prediction 259 299 - -
Mibi06g0464 415 MobiDBLite consensus disorder prediction 41 60 - -
Mibi06g0464 415 ProSiteProfiles NAC domain profile. 59 207 IPR003441 GO:0003677|GO:0006355
Mibi06g0464 415 MobiDBLite consensus disorder prediction 209 234 - -
Mibi06g0464 415 FunFam NAC domain-containing protein 35 68 210 - -
Mibi06g0464 415 Gene3D NAC domain 68 210 IPR036093 GO:0003677|GO:0006355
Mibi06g0464 415 MobiDBLite consensus disorder prediction 273 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0464 Mibi-ChrMibi06 16962161 16966545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0464 58 223 NAC Transcription Factor Family AT2G02450 92.771 9.16e-115 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g0464 NAM 2.5e-35 No_clan