Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0440 ATGGGTTGCCATTGCACACCACCTCTAAAAGGTCAGTTAGGATGTGGAGATGCGTGTCTAAACCGGATACTTAACATTGAATGTGTTCAAGGGGGCTGCCCATGCGGGGATCTCTGTTCAAATCAGCAGGTGCTTGATGTGCGTGCTTATTGGGCACGACAAAGAGAATATGGTTTGAAGGGTCATAGACATTTCTACTTCATGACCTTGAATGACAGTGAGGTGATTGATACTAAGGCAAAAGGGAACCTGGGGCGTTTTGTTAGTCATAGTTGTGATCCTAACTGTAGAACAGAAAAGGTGCATACATTACCTGTAGAAAATGTGGTGTTTTCACTGGAAGCTGCTCATAAGAAAAAGTTTGTATCGTTTTGTTTATATGTGCTTTTGTCAATGTGTGTATACGAGTGTTTTCTATGCTTGTGA 426 0.4202 MGCHCTPPLKGQLGCGDACLNRILNIECVQGGCPCGDLCSNQQVLDVRAYWARQREYGLKGHRHFYFMTLNDSEVIDTKAKGNLGRFVSHSCDPNCRTEKVHTLPVENVVFSLEAAHKKKFVSFCLYVLLSMCVYECFLCL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0440 141 Pfam SET domain 64 101 IPR001214 GO:0005515
Mibi06g0440 141 SUPERFAMILY SET domain 1 103 IPR046341 -
Mibi06g0440 141 Pfam AWS domain 12 43 IPR006560 GO:0005634|GO:0018024
Mibi06g0440 141 SMART shorttest3 1 57 IPR006560 GO:0005634|GO:0018024
Mibi06g0440 141 PANTHER SET DOMAIN PROTEINS 44 100 - -
Mibi06g0440 141 ProSiteProfiles AWS domain profile. 1 48 IPR006560 GO:0005634|GO:0018024
Mibi06g0440 141 Gene3D SET domain 1 46 IPR046341 -
Mibi06g0440 141 Gene3D SET domain 47 126 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0440 Mibi-ChrMibi06 16310105 16313837 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi06g0440 SET 4.4e-05 No_clan