Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0401 ATGAAGTTGGAGAACTCAAACGGAGAGATCTTCGCTGAAAATAATGCCTCTGATGGTTTTCAGTCGCCAATTTCTTCTATGGCCAATGGGTCTGATGTAGATAAAGATGGGGAAGAGATATTCGTGCCTCCTTTGAACTTCGCTATGGTCGATAATGGCATTTTCAGAGCGGGTTTCCCTGATTCTGCTAATTTTGGATTTTTGAAATCTCTTCGCCTCCGTTCCGTTATATGCTTGTGCCCTGAACCATATCCAGAAGCAACTTCTGAATTTTTGAAGGCTAATGGAATAAGACTCTATCAATTTGGGATCGACGCCTTTAAGGAACCTTTTGTAAATATCCCTGAGCATACAGTGCGTGAAGCGTTGCAAGTAGTCCTTGATGTTAGGAATCACCCTGTGCTAATTCACTGCAAACGAGGAAAGCATCGCACTGGATGTATAGTGGGATGCTTAAGGAGATTGCAGAGATGGTGTCTGTCATCTGTATTTGATGAGTACCAAAGGTTCGCTGCTGCCAAAGCTAGAGTGTCAGATCAGAGGTTTATAGAATTGTTTGACATTTCTAGTTTGAAGAACAATCCAATGTCATTTTCGTGCTCAAAGAAGTAG 612 0.4199 MKLENSNGEIFAENNASDGFQSPISSMANGSDVDKDGEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVICLCPEPYPEATSEFLKANGIRLYQFGIDAFKEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKNNPMSFSCSKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0401 203 CDD PFA-DSP_Siw14 41 187 - -
Mibi06g0401 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 188 IPR029021 -
Mibi06g0401 203 FunFam probable tyrosine-protein phosphatase At1g05000 40 190 - -
Mibi06g0401 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 136 146 IPR016130 GO:0016311|GO:0016791
Mibi06g0401 203 Gene3D Protein tyrosine phosphatase superfamily 40 190 IPR029021 -
Mibi06g0401 203 PRINTS Plant and fungal dual specificity phosphatase signature 114 128 IPR020428 GO:0016791
Mibi06g0401 203 PRINTS Plant and fungal dual specificity phosphatase signature 41 58 IPR020428 GO:0016791
Mibi06g0401 203 PRINTS Plant and fungal dual specificity phosphatase signature 78 91 IPR020428 GO:0016791
Mibi06g0401 203 PRINTS Plant and fungal dual specificity phosphatase signature 97 111 IPR020428 GO:0016791
Mibi06g0401 203 Pfam Tyrosine phosphatase family 42 194 IPR004861 -
Mibi06g0401 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 200 IPR020422 GO:0006470|GO:0008138
Mibi06g0401 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 41 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0401 Mibi-ChrMibi06 14979545 14982103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0401 13 203 Protein tyrosine phosphatase (PTP) family AT4G03960 67.539 5.45e-97 278