Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0390 ATGAACTTCACTCAAATTCATGAAAACAATGATCACCATGAATTTGAGGATCAAGATCCTTGCCTCCAAGCCTTGATCCTAACATGTGGACACACATACCCTGCCATTATAAACGCAGCCACTGATCTTAACCTTTTCGATATCATCGCAAAGGGAAGCCCCAACAATGGCGGTTCCCTTATTTCAGTGTCTGAGATTGCTTCTCAGCTCCCTGTTCTTTCCTCTAAGGTTTCCACGTCAAAACTGGATCGCATGCTTCGTTTTCTAGTCAGTTTCTCACTCCTGACTTGCTCTGTTCGCACCAATGAAGATGGAAGCACAGAGAAGCTTTATGGACTCTCCCCCACTGGAAAATACTTCGTCAGTAAACAAGATGGTTCCCCCACCTGGGCTTCCCTCTTCCCCAAGCTGTCCTACCACCCATACATGGCCCGAGTCTGGCTGGAATGCAAAGAGGCGGTTCTGGATGGAGGGGTGGACATATTTAAGAAAGTAAATGGGCAGAGAATGTATGAGTATGTGGAGAAGGATTTAGAGCTGAAGAACTTGTTTCAGGCGACAATGGCCCAAATATCTGCCCTACACATGGAGAAGATTCTTGAAGTTTACAAAGGCTTCGAAGGCATATCTCAGCTTGTTGACGTGGCTGGTGGAATTGGTCAAAGTCTCATGATGATCATCTCCAAGTATCCTTCTTTAAAGGGTGTTAATTTTGACCTCCCACGTGTCGTCCAAGACGCCCCCCGCTTCCCAGGACTAACACATGTAGGAGGGGACATGTTCAAGAGTATACCAGAAGGAGAAGCTATAATGATCAAGGGAACAACTCATAACTGGTCAGATGAGAAGTGCGTGCAACTTTTTAGTAATTGCAGAGAAGCATTGAAGGAAGGTGGGAAGTTGATAATAATAGATCTGATGATGCCAGAGAATCCAGAAATCACCAATTCTGCGAAATATCTGAGCATCTTTGACAGTGTGATGCTATTGCAAGGAGGCGGAAGGGAAAGAACTGAGAAGGAATTTGAGATTCTGTGCAAAAGAGCTGGCTTTTCTGGCTTCAAGCTTGTTTGTCGTGCTTTGTCCAATATCTTAGGAGTCATGGAATTTTATAAATGA 1119 0.4459 MNFTQIHENNDHHEFEDQDPCLQALILTCGHTYPAIINAATDLNLFDIIAKGSPNNGGSLISVSEIASQLPVLSSKVSTSKLDRMLRFLVSFSLLTCSVRTNEDGSTEKLYGLSPTGKYFVSKQDGSPTWASLFPKLSYHPYMARVWLECKEAVLDGGVDIFKKVNGQRMYEYVEKDLELKNLFQATMAQISALHMEKILEVYKGFEGISQLVDVAGGIGQSLMMIISKYPSLKGVNFDLPRVVQDAPRFPGLTHVGGDMFKSIPEGEAIMIKGTTHNWSDEKCVQLFSNCREALKEGGKLIIIDLMMPENPEITNSAKYLSIFDSVMLLQGGGRERTEKEFEILCKRAGFSGFKLVCRALSNILGVMEFYK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0390 372 SUPERFAMILY "Winged helix" DNA-binding domain 16 124 IPR036390 -
Mibi06g0390 372 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Mibi06g0390 372 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Mibi06g0390 372 Gene3D Vaccinia Virus protein VP39 129 372 IPR029063 -
Mibi06g0390 372 PIRSF O-mtase 1 372 IPR016461 GO:0008168
Mibi06g0390 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 360 IPR029063 -
Mibi06g0390 372 Gene3D - 3 120 IPR036388 -
Mibi06g0390 372 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Mibi06g0390 372 PANTHER O-METHYLTRANSFERASE 27 359 IPR016461 GO:0008168
Mibi06g0390 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0390 Mibi-ChrMibi06 14635055 14636947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0390 14 361 Monolignol Biosynthesis Gene Families AT5G54160 44.126 4.22e-99 296