Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0386 ATGGCAACTTTGTTCAACTTAATCTTATCTTTATCACTTCTTCTAGTTGTTCCATCCTTGTTTCCCTCTTTGGCTTTGGGTTATTCCTTCAATGACATCAAACTATGGTGTAACCAAACCCCTAATCCTCAACCATGTGTGCATTTCTTGAACCAAAACCCTACCCACCAACACAAACCCATAAACAACAAACATGATTTCTTCAAGCTTTCTCTCCAGCTCGCCCAAGAGCGAGCTCTAGTCGGCCATGAAAACGTGGTTTCGGTCGGCCCAAAGTGCCGAAACCAAAGGGAAAAACTTGCATGGGCTGATTGCCTAGAGTTGTATGAGCACACCATACTCAAACTCAACAAAACCCTAAACCCTAACACAAAGTGCACCCAAATTGATACACAAACATGGCTCAGCTCAGCCCTCACAAATCTTGAGTCATGTAAAGCTGGGTTTTATGAACTTGGGGTCCAAGACTATGTGTTGCCATTGATGTCCAACAATGTCACCAAGTTGCTAAGCAACACTTTGGCTTTAAACAAGGTTCCATATGATGAAGAACCAAGTTATAAAGATGGGTTCCCAACTTGGGTCAAGCCTGGTGATAGAAAGTTGTTGCAAAGTTCTTCTCCATCTTCTCAGGCAAATGTCGTGGTGGCTAAAGACGGCTCCGGCCACTTCACAACAGTTAGTGCCGCCATAAGTGCTGCACCAAAGAGTAGTAGTGGGAGGTATGTTATATACGTGAAGGCAGGAGTATACAACGAACAAGTTGACATAAAGCTCAACAATATCATGTTAGTCGGAGATGGTATTGGAAAAACTATCATTACTGGTAGCAATAGTGTTGGAGGAGGCACTACTACCTTTCGTTCTGCAACTGTCTCTGCTGTTGGGGATGGATTTATTGCTCAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTGGCACTACGTTCTGCTTCAGATTTATCAGTTTTTTACAGATGTAGCTTTGAAGGTTACCAAGACACTTTATATGTGTTCTCTGAGAGACAATTTTATAGGGAATGTGACATTTATGGGACAGTAGATTTTATCTTTGGTAATGCAGCAGTGGTTTTCCAAAACTGCAACCTTTTTGCTAGGAATCCTCCCAACAAAGTCAACACGGTCACAGCCCAAGGTCGAACCGATCCGAACCAAAATACAGGAATTTCTATTCATAATTGTAAGGTCACTGCTGCTTCAGACTTACAACCAGTTCAAAGCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGAACAGTTTTCATGAAGACTTTCTTGGATAGTTTGATTGATCCTGCTGGTTGGTTGGAATGGAGTGGTAACTTTGCCTTAAGCACTTTATATTATGGAGAGTATATGAATACAGGTTCTGGTTCATCCACTTCAAATCGTGTTAAGTGGTCAGGTTACCACATAATCACTGATGCTTCAGAAGCTTCGAAATTCACTGTCGCAAACTTCATTGGAGGGAATTCATGGCTTCCAGCTACCAATGTTCCTTTCACCTCTAGTTTATAG 1566 0.4208 MATLFNLILSLSLLLVVPSLFPSLALGYSFNDIKLWCNQTPNPQPCVHFLNQNPTHQHKPINNKHDFFKLSLQLAQERALVGHENVVSVGPKCRNQREKLAWADCLELYEHTILKLNKTLNPNTKCTQIDTQTWLSSALTNLESCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVPYDEEPSYKDGFPTWVKPGDRKLLQSSSPSSQANVVVAKDGSGHFTTVSAAISAAPKSSSGRYVIYVKAGVYNEQVDIKLNNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVSAVGDGFIAQGITFRNTAGASNHQAVALRSASDLSVFYRCSFEGYQDTLYVFSERQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKVNTVTAQGRTDPNQNTGISIHNCKVTAASDLQPVQSSVKTYLGRPWQQYSRTVFMKTFLDSLIDPAGWLEWSGNFALSTLYYGEYMNTGSGSSTSNRVKWSGYHIITDASEASKFTVANFIGGNSWLPATNVPFTSSL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0386 521 CDD PMEI-like_3 35 178 - -
Mibi06g0386 521 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 179 IPR006501 GO:0004857
Mibi06g0386 521 Gene3D - 207 521 IPR012334 -
Mibi06g0386 521 SMART PMEI_2 28 176 IPR006501 GO:0004857
Mibi06g0386 521 FunFam Pectinesterase 207 521 - -
Mibi06g0386 521 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Mibi06g0386 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 179 IPR035513 -
Mibi06g0386 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Mibi06g0386 521 SUPERFAMILY Pectin lyase-like 208 518 IPR011050 -
Mibi06g0386 521 SMART complete 246 424 IPR006633 -
Mibi06g0386 521 Pfam Plant invertase/pectin methylesterase inhibitor 32 176 IPR006501 GO:0004857
Mibi06g0386 521 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Mibi06g0386 521 PANTHER PECTINESTERASE 16 513 - -
Mibi06g0386 521 Pfam Pectinesterase 213 507 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0386 Mibi-ChrMibi06 14585805 14587748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0386 14 521 Carbohydrate Esterase AT2G45220 66.339 0.0 718