Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0384 ATGACAACTTTTAGCTTTTACATTCGAATAGTCATTGCGTTAATTGTTCCCTTATTTCTACTTTGCTCTTCTGTCTCTGGGTATTCATGGAATGAGGTTAAGCTTTGGTGCAACCAAACCCCTAATCCTCAACCATGTGAGTACTTCCTAAACAACAATCCCATTCACAGCCAAAAGATCATCAAACACAAAGAAGATTTTCTCACGCTTTCACTTCAACTAGCCCAAGAGCGAGCATTGGTTGGCCATGCAAATACTCTTTCTCTAGGATCCAAGTGTCGTAATGCTCATGAAAAAGCTGCATGGGCTGATTGCATTGAGCTTTATGAGCACACCATCCACAGACTCAACAAAACCCTTGACCCCAACACCAAATGCTCTCAAGTTGATGCTCAAACATGGCTCAGCACGGCTCTCACCAACCTTGAGACGTGCCGAGCCGGTTTCTATGAGCTCGGGGTTCAAGACTACGTGCTGCCTTTGATGTCCAACAATGTCACCAAGTTGTTGAGCAACACTTTGGCTCTGAACAAAGTTGATTACAAAGAGCCAAGTTATAAAGATGGGTTCCCAACATGGGTTAAGCCTGGAGATAGGAAGTTGTTGCAGTCTTCTTCAACTTCCAGGGCAAACGTTGTTGTGGCAAAAGATGGATCTGGCAAATACACAACTATAAGTGCTGCTGTAAACGCTGCGCCAAAGAGTAGTAGTGGGAGATATGTGATATATGTGAAGGCTGGAGTTTACAATGAACAGGTAGAGATAAACGCAAAGAATATAATGTTGTTGGGAGATGGTATTGGGAAGACCATAATCACAGGAAGCAAAAGTGTTGGAGGAGGCGCAACAACCTTCCGGTCAGCCACCGTTGCCGTTGTAGGAGATGGGTTTATTGCTCAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAACCATCAAGCTGTTGCCCTACGTTCTGGATCAGATTTATCAGTTTTTTACAGATGCAGCTTTGAAGGATACCAAGACACATTGTACGTCCACTCTGAGCGACAATTCTATAGAGAATGTGACATTTACGGCACCGTTGATTTCATCTTTGGAAACGCGGCTGTAGAGTTCCAGAATTGCAACATTTATGCGAGAAACCCTCCCAACAAAGTCAACACGATCACAGCCCAAGGTCGAACCGATCAGAACCAAAACACAGGAATTTCCATCCACAATTGTAAGGTCACAGCTGCTTCAGATCTAAAACCAGTTCAAAACTCTGTGAAGACCTATCTAGGAAGGCCATGGCAACAATATTCCCGAACAGTCTTCATGAAGACTTTTCTTGATAGTTTGATAAATCAAGCTGGTTGGTTGGAATGGAGTGGTAACTTTGGCTTGAACACTTTATATTATGGAGAGTATATGAATACAGGTTCAGGTTCATCAACATCAAATCGAGTTAAGTGGTCAGGTTACCACGTAATCACCAGTGCTTCAGAGGCTTCAAAGTTCACTGTTGGAAATTTCATAGCCGGCAATTCATGGTTGCCAGCAACTGGTGTGCCTTTTACCTCTGGCTTATAA 1560 0.4333 MTTFSFYIRIVIALIVPLFLLCSSVSGYSWNEVKLWCNQTPNPQPCEYFLNNNPIHSQKIIKHKEDFLTLSLQLAQERALVGHANTLSLGSKCRNAHEKAAWADCIELYEHTIHRLNKTLDPNTKCSQVDAQTWLSTALTNLETCRAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVDYKEPSYKDGFPTWVKPGDRKLLQSSSTSRANVVVAKDGSGKYTTISAAVNAAPKSSSGRYVIYVKAGVYNEQVEINAKNIMLLGDGIGKTIITGSKSVGGGATTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVEFQNCNIYARNPPNKVNTITAQGRTDQNQNTGISIHNCKVTAASDLKPVQNSVKTYLGRPWQQYSRTVFMKTFLDSLINQAGWLEWSGNFGLNTLYYGEYMNTGSGSSTSNRVKWSGYHVITSASEASKFTVGNFIAGNSWLPATGVPFTSGL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0384 519 CDD PMEI-like_3 35 178 - -
Mibi06g0384 519 SMART PMEI_2 28 176 IPR006501 GO:0004857
Mibi06g0384 519 ProSitePatterns Pectinesterase signature 1. 236 255 IPR018040 -
Mibi06g0384 519 FunFam Pectinesterase 28 179 - -
Mibi06g0384 519 Pfam Plant invertase/pectin methylesterase inhibitor 32 176 IPR006501 GO:0004857
Mibi06g0384 519 Gene3D - 205 519 IPR012334 -
Mibi06g0384 519 PANTHER PECTINESTERASE 15 509 - -
Mibi06g0384 519 FunFam Pectinesterase 205 519 - -
Mibi06g0384 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 179 IPR035513 -
Mibi06g0384 519 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Mibi06g0384 519 Pfam Pectinesterase 211 505 IPR000070 GO:0030599|GO:0042545
Mibi06g0384 519 SUPERFAMILY Pectin lyase-like 205 518 IPR011050 -
Mibi06g0384 519 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 178 IPR006501 GO:0004857
Mibi06g0384 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 179 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0384 Mibi-ChrMibi06 14551364 14553399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0384 1 519 Carbohydrate Esterase AT2G45220 68.269 0.0 733