Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0382 ATGGTAGATTTTCGCTTATTCATATCTCTCGTACTTGTCCCCATCTTATGCTCATCTTCTGCTGCTAGTTATTCCATAGATAACATCAAATTGTGGTGCAGCCAAACCCCAAATCCTCAACCATGTGAGTACTTCCTAAACAACGATCCCATTCACAGCCAAAAGATCATCAAACACAGAGATGATTTTCTCAAGCTTTCACTTCAACTAGCCCAAGAGCGAGCATTGGTTGGCCATGCAAATACTCTTTCTCTAGGACCCAAGTGCCGTAATGCTCATGAAAAAGCTGCATGGGCTGATTGCATTGAGCTTTATGAGCACACCATACACAGACTCAACAAAACCCTTGACCCCAACACCAAATGCTCCCAAGCTGACGCTCAAACATGGCTCAGCACGGCTCTAACCAACCTCGAGACATGCCGAGCCGGCTTCTACGAGCTTGGTGTTCAAGACTATGTGCTGCCTTTGATGTCCAACAATGTCACAAAGTTGTTGAGCAACACTTTGGCGCTGAACAAAGTTGAATACAAAGAGCCAAGTTATAAAGATGGGTTCCCAACATGGGTTAAGCCTGGAGATAGGAAGTTGTTGCAGTCATCTTTAACTTCTAGGGCTAACGTTGTTGTGGCAAAAGATGGATCTGGCAAATACACAACTATAAGTGCTGCTGTAAATGCAGCACCAAAGAGTAGCAGTGGGAGGTATGTGATATATGTGATGGCTGGAGTTTACAATGAACAGGTAGAGATAAATGCAAAGAATATAATGTTGTTGGGAGATGGTATTGGGAAGACCATAATCACAGGAAGCAAAAGTGTTGGAGGAGGCACAACAACCTTCCGGTCAGCCACCGTTGCCGTTGTAGGAGATGGGTTTATTGCTCAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAACAATCAAGCTGTTGCCCTACGTTCTGGATCAGATTTATCGGTGTTTTATAAATGTAGCTTTGAAGGATACCAAGACACATTGTACGTTCACTCTGAGCGACAATTCTATAGAGAATGTGACATTTACGGCACCGTGGATTTCATCTTTGGAAACGCAGCTGTAGTTTTCCAGAATTGCAACATTTATGCAAGAAACCCTTCCAACAAAGTCAACACGATCACGGCCCAAGGTTCAGGTTCATCAACAGCAAGTCGAGTTAAGTGGCCAGGTTACCATGTGATCACCAGCTCTGCAGAAGCTTCAAAGTTCACTGTTGAAAATTTCATTGCCGGCAATTCATGGTTGCCAGCAACCAGTGTGCCTTTTACCTCTGGCTTATAA 1305 0.4398 MVDFRLFISLVLVPILCSSSAASYSIDNIKLWCSQTPNPQPCEYFLNNDPIHSQKIIKHRDDFLKLSLQLAQERALVGHANTLSLGPKCRNAHEKAAWADCIELYEHTIHRLNKTLDPNTKCSQADAQTWLSTALTNLETCRAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYKEPSYKDGFPTWVKPGDRKLLQSSLTSRANVVVAKDGSGKYTTISAAVNAAPKSSSGRYVIYVMAGVYNEQVEINAKNIMLLGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNNQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIYARNPSNKVNTITAQGSGSSTASRVKWPGYHVITSSAEASKFTVENFIAGNSWLPATSVPFTSGL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0382 434 CDD PMEI-like_3 31 174 - -
Mibi06g0382 434 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Mibi06g0382 434 Gene3D - 387 434 IPR012334 -
Mibi06g0382 434 FunFam Putative pectinesterase 57 204 394 - -
Mibi06g0382 434 FunFam Pectinesterase 24 175 - -
Mibi06g0382 434 SUPERFAMILY Pectin lyase-like 201 433 IPR011050 -
Mibi06g0382 434 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Mibi06g0382 434 PANTHER PECTINESTERASE 11 386 - -
Mibi06g0382 434 Pfam Pectinesterase 207 385 IPR000070 GO:0030599|GO:0042545
Mibi06g0382 434 Gene3D - 202 386 IPR012334 -
Mibi06g0382 434 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Mibi06g0382 434 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 175 IPR035513 -
Mibi06g0382 434 SMART PMEI_2 24 172 IPR006501 GO:0004857
Mibi06g0382 434 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0382 Mibi-ChrMibi06 14428333 14430404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0382 385 434 Carbohydrate Esterase AT2G45220 64.000 2.39e-13 69.7