Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0354 ATGGAACTTTCCAGTGAAGAAGGAGAGATCCCAATCCCAATGAACAGTGCCACTAGTTATGGAGGAGGTGGTAATAATGGCCATGGCCACCTGATCCACCATCATCATCATGAGCCTGCAATCCACAGCCACATGATCTCCAATTCCTCAATACTACCAGTAGCATCAGCGCCGCCCCACAACGGAGGCATGGGAGGCGGTGGCAGCAGCATGGAGGAGGATGATGATCAGCAGCATGGGCCCTACAGCAAGAAAATAGTGGTGAAGTACAGAGAATGCTTGAAGAACCATGCAGCTTCCATGGGAGGTAATGCAACAGATGGTTGTGGTGAGTTCATGCCCAGTGGAGAAGAAGGAACACTTGAAGCCCTCACTTGTTCAGCTTGCCATTGCCACAGAAACTTCCACAGAAAAGAAGTTGAGGGCCAAGATCAACAAGACCATCTTCTTCACCACCACCACCATCATCAATATCTTCACCATCTTCATAACACTAATAATCATCCTTACAGGTTAGGTGGTAGGAAGCTCCTTCTTCCTCCTCCTCCTGAGACTCTTGGCTACCCTACACCACCACCACCACCACCAGGTAATATCTTACCTTCTAGAATGATCATGCCATACAATGTCATTGGGTCCCACCACCACTCATCCCTCCCTTCAGACTTATCTGATGAGCAAGATGATCATCATCATCATGGCATAATGAGGCCACATCATCATCATCAGAATAAGAAGAGGTTCAGGACAAAGTTCACTCAGGAGCAGAAGGAGAAAATGCTGAGTTTTGCTGAGAGAGTTGGGTGGAAGATTCAGAAACAAGAAGAGTCTGTGGTTCAACAGTTTTGCCAAGAGATTGGAGTGAAGAGAAGAGTTCTTAAGGTTTGGATGCACAACAATAAGCACAACCTTGCCAAAAAGATGAATCCCACTACAACGACAACAACCACCACTCCTCCTCCTACTACTTCACCACCTTAA 981 0.4689 MELSSEEGEIPIPMNSATSYGGGGNNGHGHLIHHHHHEPAIHSHMISNSSILPVASAPPHNGGMGGGGSSMEEDDDQQHGPYSKKIVVKYRECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTCSACHCHRNFHRKEVEGQDQQDHLLHHHHHHQYLHHLHNTNNHPYRLGGRKLLLPPPPETLGYPTPPPPPPGNILPSRMIMPYNVIGSHHHSSLPSDLSDEQDDHHHHGIMRPHHHHQNKKRFRTKFTQEQKEKMLSFAERVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKMNPTTTTTTTTPPPTTSPP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0354 326 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 89 140 IPR006456 -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 1 33 - -
Mibi06g0354 326 Pfam ZF-HD protein dimerisation region 88 140 IPR006456 -
Mibi06g0354 326 FunFam Zinc-finger homeodomain protein 2 233 306 - -
Mibi06g0354 326 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 90 139 IPR006456 -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 304 318 - -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 303 326 - -
Mibi06g0354 326 SUPERFAMILY Homeodomain-like 231 306 IPR009057 -
Mibi06g0354 326 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 75 304 - -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 219 233 - -
Mibi06g0354 326 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 245 301 IPR006455 -
Mibi06g0354 326 Gene3D - 234 307 - -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 213 246 - -
Mibi06g0354 326 MobiDBLite consensus disorder prediction 52 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0354 Mibi-ChrMibi06 13569309 13570289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0354 1 309 ZF-HD Transcription Factor Family AT2G02540 45.846 2.61e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi06g0354 ZF-HD_dimer 4.1e-29 No_clan