Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0342 ATGGTACAGAGGATTGGGACTCGACTCTTTGTGAGCAGATTATCATTCTTCACGACGGATAGCCACCTCAGAAATCTGTTTTCTCCATTTGGAAAAATCACGGAAGCTAGTCTAGTGAAAGACCCAAAAACTCAAAGGCCTAAAGGATTTGGCTTTGTCTCATATGAGTCAGAAGTTGAAGCTGAGAGGGCTATGAACGCTATGAATGCCAGGATAATTGACGGAAGGTTGATTTTTGTAGAACTTGCAAAGGCTACAAGATCTAAAGAAGATGGTGCTTCTTGA 285 0.4175 MVQRIGTRLFVSRLSFFTTDSHLRNLFSPFGKITEASLVKDPKTQRPKGFGFVSYESEVEAERAMNAMNARIIDGRLIFVELAKATRSKEDGAS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0342 94 SUPERFAMILY RNA-binding domain, RBD 6 87 IPR035979 GO:0003676
Mibi06g0342 94 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Mibi06g0342 94 SMART rrm1_1 8 81 IPR000504 GO:0003723
Mibi06g0342 94 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Mibi06g0342 94 Gene3D - 2 94 IPR012677 -
Mibi06g0342 94 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 85 - -
Mibi06g0342 94 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0342 Mibi-ChrMibi06 11175190 11177309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0342 7 90 Eukaryotic Initiation Factors Gene Family AT2G23350 32.143 3.61e-09 50.4