Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi06g0339 | ATGGATCAGTACGAGAAAGTTGAGAAGATTGGTGAAGGCACCTATGGTGTTGTTTACAAGGCCCGTGATCGCGTCACAAATGAGACCATAGCATTGAAGAAAATTCGATTGGAGCAGGAAGATGAGGGAGTGCCTAGCACTGCGATTCGCGAGATTTCTCTCTTGAAAGAAATGCAGCATCGGAATATTGTTAGGTTACAGGATGTAGTACACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTGGACTTAGATCTGAAGAAGCACATGGATTCATCTCCAGATTTTGCAAAAGACCATCGACAAATAAAAATGTTTCTATATCAAATTCTGTGCGGCATTGCTTACTGTCATTCGCATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGCAGTAATTCGCTAAAGCTTGCAGATTTTGGATTGGCCCGGGCATTTGGCATTCCTGTCAGGACATTTACACATGAGGTGGTGACACTATGGTACAGAGCTCCAGAAATATTACTTGGGTCTCGCCAGTATTCTACCCCTGTGGATGTTTGGTCTGTGGGCTGTATATTTGCAGAGATGCTGAACCAACGACCACTATTTCCTGGAGACTCTGAGATTGACGAATTGTTTAAAATATTCAGAATTATGGGCACACCAAATGAGGATACGTGGCCTGGAGTGACTTCATTGCCTGACTTTAAATCATCCTTTCCCAAGTGGCTTTCAAAGGACCTGGCAACTGTCGTTCCAAATCTTGAGCCAGCTGGCATTGATCTTCTTTCTAGTATGCTTTGCTTGGATCCCAGCAGAAGAATTACAGCCAGGAATTCTCTTGAGCATGAGTACTTCAAAGACATAAAGTTTGTTCCCTGA | 885 | 0.4316 | MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDHRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMLNQRPLFPGDSEIDELFKIFRIMGTPNEDTWPGVTSLPDFKSSFPKWLSKDLATVVPNLEPAGIDLLSSMLCLDPSRRITARNSLEHEYFKDIKFVP | 294 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi06g0339 | 294 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 292 | - | - | |
| Mibi06g0339 | 294 | Pfam | Protein kinase domain | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi06g0339 | 294 | CDD | STKc_CDK1_CdkB_like | 4 | 287 | - | - | |
| Mibi06g0339 | 294 | SMART | serkin_6 | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi06g0339 | 294 | FunFam | Cell division control protein 2 | 1 | 84 | - | - | |
| Mibi06g0339 | 294 | FunFam | Cell division control protein 2 homolog | 86 | 292 | - | - | |
| Mibi06g0339 | 294 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
| Mibi06g0339 | 294 | ProSiteProfiles | Protein kinase domain profile. | 4 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi06g0339 | 294 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 123 | 135 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi06g0339 | 294 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 84 | - | - | |
| Mibi06g0339 | 294 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 287 | - | - | |
| Mibi06g0339 | 294 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 290 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi06g0339 | Mibi-ChrMibi06 | 11052073 | 11064525 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi06g0339 | 1 | 294 | Core Cell Cycle Gene Families | AT3G48750 | 85.374 | 0.0 | 528 |
Transcription factors information