Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0275 ATGGCAAATGACATTCTGGGGTATGCAAGATACATGATTGAATATTCGAACCAAAATTTTATGACTGTGCTGGTAAATGTTGACATTTTTTACCACAACGATGATCAGCCAATAGAAACATCTAAGAAGGATGAAACTTCCAAATTGAAAGGAGTGAAGCTTGAAGAAGGAGAAGAAGAAAGGCTAAATGATGAGTGTGGAATTTGCATGGAAAATTTTAGGGATGATGTTGTTCAAATGCCATGCTCTCATTTCTTTCATGGAAATTGCATTCTTAGTTGGTTCGTGAAGAAGAATAATTGCCCCCTATGTAGATTCCAAATGCCTACATCATCAATTGATGATTTCATCAAAACAATAGATAGCATCTATGTAGTGTATAACAAGCTGAAGATGGTGGCATAA 405 0.3556 MANDILGYARYMIEYSNQNFMTVLVNVDIFYHNDDQPIETSKKDETSKLKGVKLEEGEEERLNDECGICMENFRDDVVQMPCSHFFHGNCILSWFVKKNNCPLCRFQMPTSSIDDFIKTIDSIYVVYNKLKMVA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0275 134 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 41 109 - -
Mibi06g0275 134 ProSiteProfiles Zinc finger RING-type profile. 66 105 IPR001841 -
Mibi06g0275 134 CDD RING-H2_PA-TM-RING 65 105 - -
Mibi06g0275 134 SUPERFAMILY RING/U-box 65 110 - -
Mibi06g0275 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 111 IPR013083 -
Mibi06g0275 134 Pfam Ring finger domain 64 105 IPR001841 -
Mibi06g0275 134 SMART ring_2 66 104 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0275 Mibi-ChrMibi06 9097652 9098056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0275 65 133 C3H Transcription Factor Family AT5G02750 46.479 7.93e-17 72.8