Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0269 ATGAGACTATCTTCATCTGGTTTTAGCCCTCCACCTCCGGAAGGAGAAAAACGAGTCCTGGATTCAGAATTATGGCATGCATGCGCTGGCCCTCTTGTTTCGTTACCAGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGTCACAGTGAACAGGTTGCTGCGTCTACCAACAAGGAAGTGGATGCCCATATTCCTAATTACCCTAGCTTGCCTCCGCAGCTTATTTGTCAGCTTCATAATTTGACCATGCATGCGGATTCGGAGACAGATGAAGTATATGCACAGATGACCTTGCAAGCTTTAAATCCTCAAGAGCAGAAAGAGGCGTACCTTCCTGCAGAGTTGGGCACTCCTAGTAAGCAGCCAACGAATTACTTTTGCAAAACTTTGACAGCCAGTGACACAAGCACACATGGGGGATTCTCTGTTCCACGCCGAGCAGCTGAGAAAGTGTTTCCACCTCTGGACTTCTCCCAACAACCTCCATGTCAAGAGCTAATTGCTAGGGATTTGCATGGTAATGAATGGAAATTCAGGCATATCTTTCGAGGTCAACCCAAAAGGCATCTACTTACAACAGGATGGAGTGTGTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTTCTGTTTATCTGGAATGAAAAGAATCAGCTGCTTCTCGGTATCCGGCGTGCTAATCGTCCACAAACTGTAATGCCTTCATCAGTGTTATCAAGTGACAGCATGCACTTGGGGCTTCTGGCTGCTGCTGCTCATGCAGCCGCAACTAACAGTCGTTTTACCATTTTCTATAATCCTCGCGCTAGCCCATCTGAATTTGTCATACCCTTAGTTAAGTATGTTAAAGCTGTGTATCATACTAGAGTCTCAGTTGGCATGCGCTTCAGGATGCTGTTTGAAACTGAGGAATCAAGTGTGCGGAGATATATGGGCACCATAACTGGTATTAGTGACCTGGATCCTGTTCGATGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACAGCAGGAGAGAGGCAACCTAGAGTATCCCTATGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCATCTTTTCCTCTTAGGCTTAAGCGACCATGGCCTCCAGGATTGCCTTCCTTCCAGGGCATGAAGGATGACAGTTTTAGCTTAAGTAATCAGCTGTTATGGCTTCGAGACACCACAGACAGAGGTCTTCAGTCTCTTAATTTCCAGGGCTTTGGGTTCAATCCTTGGATGCAGCCAAGGCTTGACCCCTCCATGTTGAGTTCACCAACTGACATGTACCAAGCTATGGCTAATCCTGCAGTTCAGGATATGAGGACTTTGGATCCTTCCAAACAGCATCCTGCATCTTTTCTTCAATTTCAGCAGCCACAGAACTTCCCCAATAGGACTGCTGCTTTAATGCAGGCCCAAATGTCCCAGCAGGCTCAACTCCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGGCTCCAACTCAGATGCAACTTCAGCAGCAGCGCTCGTTCAATAATCAACATCAGCAGCCACAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCCTCTGCAATGTCCCAGTTTGCATCGACTCCACAACCCCATTCACCGTCCATGCAAACTATGTCCTCGCTTTGCCAACACCAAAACTTTTCTGATTCAAATGTGAATTCCATGAATGCATCCATAGTTTCTCCCTTGCACAGTATCTTAGGTTCATTTTCCCAGGATGAATCATCCCACCTTCTCAACCTCCCCAAGAGTAGCTCTTGGATGCCTGTTCAAACATCTGCTGCCTGGCCCTCCAAGCGTGTTGCAGTTGATCCTCTACTTTCTTCTGGATCTTCTCAGTGCACACTGCCGCAGTTGGAGTTGTTAGGGCATCCACAAAGTACTACATCGCAGAATATTATTTCATTGCCACCTTTTCCTGGTCGGGAGTGTTCAATAGACCAAGAAGGGAGCACCGATCCTCAGAACAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGTCGAGCCTCAAGGGAGTTGATAACAACAATGACTCTGGCATTGGGCCATTTCAGTCATCTAATTATCTGGATGCTACAGGAACTGATTCTTCATTGAATCATGGAATTACGCATGGCATTGCTGAATCAAACTTCCTTGAAATTCCAGATAATGGGGGTCAAGGAGACCCACATAATAAAACCTTTGTTAAGGTTCACAAGTCAGGGTCCTGTGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGTGGTGAACTTGCCCGAATGTTTGGCCTTGAAGGCAAGTTAGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTATTGACAGAGAGAATGACGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATGGTGTATCAAAATACTTTCTCCCCAAGAAGTGCAGCAAATGGGCAACAATGGGCTCGAGCTTCTGAACTCAGTTCCAATTCAGAGGCTCTCTAATGGCGTCTGTGATGACTACACGAGCTGCCCTGACCCAAGAAATTTAAGCACTGGGATAGCAGCCAATGGTGTGACAATCTAA 2667 0.4619 MRLSSSGFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNLTMHADSETDEVYAQMTLQALNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFQGMKDDSFSLSNQLLWLRDTTDRGLQSLNFQGFGFNPWMQPRLDPSMLSSPTDMYQAMANPAVQDMRTLDPSKQHPASFLQFQQPQNFPNRTAALMQAQMSQQAQLQQACQSNQENQNSSQSLAPTQMQLQQQRSFNNQHQQPQQVVDHQQISSASAMSQFASTPQPHSPSMQTMSSLCQHQNFSDSNVNSMNASIVSPLHSILGSFSQDESSHLLNLPKSSSWMPVQTSAAWPSKRVAVDPLLSSGSSQCTLPQLELLGHPQSTTSQNIISLPPFPGRECSIDQEGSTDPQNNLLFGVNIEPSSLIVQNGMSSLKGVDNNNDSGIGPFQSSNYLDATGTDSSLNHGITHGIAESNFLEIPDNGGQGDPHNKTFVKVHKSGSCGRSLDITKFSSYHELRGELARMFGLEGKLEDPVRSGWQLVFIDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDDYTSCPDPRNLSTGIAANGVTI 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0269 888 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi06g0269 888 FunFam Auxin response factor 752 845 - -
Mibi06g0269 888 Gene3D - 752 845 - -
Mibi06g0269 888 Gene3D - 125 228 IPR015300 -
Mibi06g0269 888 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mibi06g0269 888 SMART B3_2 127 229 IPR003340 GO:0003677
Mibi06g0269 888 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mibi06g0269 888 Gene3D - 291 363 - -
Mibi06g0269 888 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Mibi06g0269 888 Pfam AUX/IAA family 753 841 IPR033389 -
Mibi06g0269 888 MobiDBLite consensus disorder prediction 491 558 - -
Mibi06g0269 888 SUPERFAMILY CAD & PB1 domains 753 831 - -
Mibi06g0269 888 ProSiteProfiles PB1 domain profile. 756 840 IPR000270 GO:0005515
Mibi06g0269 888 FunFam Auxin response factor 125 229 - -
Mibi06g0269 888 FunFam Auxin response factor 291 363 - -
Mibi06g0269 888 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 845 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi06g0269 888 CDD B3_DNA 126 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0269 Mibi-ChrMibi06 8803586 8808915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0269 1 484 B3 DNA Binding Superfamily AT1G30330 84.663 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi06g0269 AUX_IAA 5.2e-06 CL0072