Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0236 ATGAGGAGGAGGAAGATAGCCAAAACAACGCTAGAGAAGGAATCGAATGACAGAATGAAGAGATTGAAGAACAAACTGAAGAGGAGGAGGAGGCAGAAGAAGAAGCTGAAGAAGGAGAAGAGGTTGACGCCAATGAGGTTAATTCCTGTGTTTCTCACAGATGTCGATATTCTCGATTGTGGCATTTGTTGTGAGCCTTTGATTAGTCCGGTGTTTCAGTGTGAAAATGGGCATATTGCTTGTTCTTCCTGTTGTGTCCGACTTGCCTTGAAGTGTCATTTATGCCAGGCGCCCATTGGAAAAATCCGCTGCAGAGCCATTGAGAGGGTATTGGACTCCATTAAGATATCATGCCGCAATGCAAGATATGGCTGCATAGAGAAAATGAGTTACACCAACAAAAGTGTCCATGAGAAAGATTGTATCTACATCCCATGTTGGTGCCCTTATGATGATTGCCAATTCTCTGCTCCAAGCAAGATGTTATCCTGGCACATCAGCCATAAGCATCTCGGAGCTTTTTTTAGCTTTCATTATGATATCCTCATCAATTTCATGTTGCGGGTCAACCAAAAATTCATTGTTCTTCAAGAGCAGACTGACTTTAGTTTATTTATTTTAAGAAATGAGAGGGCAAATCTGGGGAATGTGATCAAAATCTTTCATGTTGGCCCCAAGTCATCAGCCGAGAGGTATCGGTATGATCTTTTTGCTAGATCACAGGATTCCTGTCTGAAACTAGATTCTTTTGTCAACCACACTCTTGGCAATGATTTTCCTCATACAAAGAAGTTCCTTCTTGTTCCAACTGATTTTTTTTATCCTTCTCAGTTTGTTCGGGTTGAAATCCGCATAAAGCAAATAAATCAAGCTGGAGCTAGTTATTTCTAG 891 0.4108 MRRRKIAKTTLEKESNDRMKRLKNKLKRRRRQKKKLKKEKRLTPMRLIPVFLTDVDILDCGICCEPLISPVFQCENGHIACSSCCVRLALKCHLCQAPIGKIRCRAIERVLDSIKISCRNARYGCIEKMSYTNKSVHEKDCIYIPCWCPYDDCQFSAPSKMLSWHISHKHLGAFFSFHYDILINFMLRVNQKFIVLQEQTDFSLFILRNERANLGNVIKIFHVGPKSSAERYRYDLFARSQDSCLKLDSFVNHTLGNDFPHTKKFLLVPTDFFYPSQFVRVEIRIKQINQAGASYF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0236 296 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 14 288 IPR044286 -
Mibi06g0236 296 SUPERFAMILY TRAF domain-like 113 273 - -
Mibi06g0236 296 Coils Coil 12 42 - -
Mibi06g0236 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 166 IPR013083 -
Mibi06g0236 296 ProSiteProfiles Zinc finger SIAH-type profile. 113 171 IPR013010 GO:0008270
Mibi06g0236 296 Pfam Seven in absentia protein family 102 242 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0236 Mibi-ChrMibi06 7803805 7806452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0236 56 170 C3H Transcription Factor Family AT2G41980 34.188 1.37e-18 82.4